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SCARNA23 (small Cajal body-specific RNA 23)

Identity

Alias_symbol (synonym)ACA12
Other alias
HGNC (Hugo) SCARNA23
LocusID (NCBI) 677773
Atlas_Id 73019
Location Xp22.11  [Link to chromosome band Xp22]
Location_base_pair Starts at 24762558 and ends at 24762687 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA23   32581
Cards
Entrez_Gene (NCBI)SCARNA23  677773  small Cajal body-specific RNA 23
AliasesACA12
GeneCards (Weizmann)SCARNA23
Ensembl hg19 (Hinxton) [Gene_View]  chrX:24762558-24762687 [Contig_View]  SCARNA23 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:24762558-24762687 [Contig_View]  SCARNA23 [Vega]
TCGA cBioPortalSCARNA23
AceView (NCBI)SCARNA23
Genatlas (Paris)SCARNA23
WikiGenes677773
SOURCE (Princeton)SCARNA23
Genetics Home Reference (NIH)SCARNA23
Genomic and cartography
GoldenPath hg19 (UCSC)SCARNA23  -     chrX:24762558-24762687 +  Xp22.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SCARNA23  -     Xp22.11   [Description]    (hg38-Dec_2013)
EnsemblSCARNA23 - Xp22.11 [CytoView hg19]  SCARNA23 - Xp22.11 [CytoView hg38]
Mapping of homologs : NCBISCARNA23 [Mapview hg19]  SCARNA23 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ609482
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_016798 NT_167197 NW_004929438
Consensus coding sequences : CCDS (NCBI)SCARNA23
Cluster EST : UnigeneHs.689695 [ NCBI ]
CGAP (NCI)Hs.689695
Gene ExpressionSCARNA23 [ NCBI-GEO ]   SCARNA23 [ EBI - ARRAY_EXPRESS ]   SCARNA23 [ SEEK ]   SCARNA23 [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA23 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677773
GTEX Portal (Tissue expression)SCARNA23
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA23
DMDM Disease mutations677773
Blocks (Seattle)SCARNA23
Protein Interaction databases
BioGRIDSCARNA23
STRING (EMBL)SCARNA23
ZODIACSCARNA23
Ontologies - Pathways
Huge Navigator SCARNA23 [HugePedia]
snp3D : Map Gene to Disease677773
BioCentury BCIQSCARNA23
ClinGenSCARNA23
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677773
Chemical/Pharm GKB GenePA144596382
Clinical trialSCARNA23
Miscellaneous
canSAR (ICR)SCARNA23 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA23
EVEXSCARNA23
GoPubMedSCARNA23
iHOPSCARNA23
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:42:26 CET 2017

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