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SCARNA26B (small Cajal body-specific RNA 26B)

Identity

Other alias-
HGNC (Hugo) SCARNA26B
LocusID (NCBI) 106633816
Atlas_Id 77967
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 155783685 and ends at 155783832 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA26B   51394
Cards
Entrez_Gene (NCBI)SCARNA26B  106633816  small Cajal body-specific RNA 26B
Aliases
GeneCards (Weizmann)SCARNA26B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:155783685-155783832 [Contig_View]  SCARNA26B [Vega]
TCGA cBioPortalSCARNA26B
AceView (NCBI)SCARNA26B
Genatlas (Paris)SCARNA26B
WikiGenes106633816
SOURCE (Princeton)SCARNA26B
Genetics Home Reference (NIH)SCARNA26B
Genomic and cartography
GoldenPath hg38 (UCSC)SCARNA26B  -     chr1:155783685-155783832 -  1q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SCARNA26B  -     1q22   [Description]    (hg19-Feb_2009)
EnsemblSCARNA26B - 1q22 [CytoView hg19]  SCARNA26B - 1q22 [CytoView hg38]
Mapping of homologs : NCBISCARNA26B [Mapview hg19]  SCARNA26B [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SCARNA26B
Gene ExpressionSCARNA26B [ NCBI-GEO ]   SCARNA26B [ EBI - ARRAY_EXPRESS ]   SCARNA26B [ SEEK ]   SCARNA26B [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA26B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106633816
GTEX Portal (Tissue expression)SCARNA26B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA26B
DMDM Disease mutations106633816
Blocks (Seattle)SCARNA26B
Protein Interaction databases
BioGRIDSCARNA26B
STRING (EMBL)SCARNA26B
ZODIACSCARNA26B
Ontologies - Pathways
Huge Navigator SCARNA26B [HugePedia]
snp3D : Map Gene to Disease106633816
BioCentury BCIQSCARNA26B
ClinGenSCARNA26B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106633816
Clinical trialSCARNA26B
Miscellaneous
canSAR (ICR)SCARNA26B (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA26B
EVEXSCARNA26B
GoPubMedSCARNA26B
iHOPSCARNA26B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:26:26 CET 2017

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