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SCARNA7 (small Cajal body-specific RNA 7)

Identity

Alias_symbol (synonym)U90
Other alias
HGNC (Hugo) SCARNA7
LocusID (NCBI) 677767
Atlas_Id 73025
Location 3q25.33  [Link to chromosome band 3q25]
Location_base_pair Starts at 160514907 and ends at 160515236 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA7   32563
Cards
Entrez_Gene (NCBI)SCARNA7  677767  small Cajal body-specific RNA 7
AliasesU90
GeneCards (Weizmann)SCARNA7
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:160514907-160515236 [Contig_View]  SCARNA7 [Vega]
TCGA cBioPortalSCARNA7
AceView (NCBI)SCARNA7
Genatlas (Paris)SCARNA7
WikiGenes677767
SOURCE (Princeton)SCARNA7
Genetics Home Reference (NIH)SCARNA7
Genomic and cartography
GoldenPath hg38 (UCSC)SCARNA7  -     chr3:160514907-160515236 -  3q25.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SCARNA7  -     3q25.33   [Description]    (hg19-Feb_2009)
EnsemblSCARNA7 - 3q25.33 [CytoView hg19]  SCARNA7 - 3q25.33 [CytoView hg38]
Mapping of homologs : NCBISCARNA7 [Mapview hg19]  SCARNA7 [Mapview hg38]
OMIM615644   
Gene and transcription
Genbank (Entrez)AY077740
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SCARNA7
Cluster EST : UnigeneHs.675953 [ NCBI ]
CGAP (NCI)Hs.675953
Gene ExpressionSCARNA7 [ NCBI-GEO ]   SCARNA7 [ EBI - ARRAY_EXPRESS ]   SCARNA7 [ SEEK ]   SCARNA7 [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677767
GTEX Portal (Tissue expression)SCARNA7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA7
DMDM Disease mutations677767
Blocks (Seattle)SCARNA7
Protein Interaction databases
BioGRIDSCARNA7
STRING (EMBL)SCARNA7
ZODIACSCARNA7
Ontologies - Pathways
Huge Navigator SCARNA7 [HugePedia]
snp3D : Map Gene to Disease677767
BioCentury BCIQSCARNA7
ClinGenSCARNA7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677767
Chemical/Pharm GKB GenePA144596367
Clinical trialSCARNA7
Miscellaneous
canSAR (ICR)SCARNA7 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA7
EVEXSCARNA7
GoPubMedSCARNA7
iHOPSCARNA7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:40:02 CEST 2017

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