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SCARNA9 (small Cajal body-specific RNA 9)

Identity

Alias_symbol (synonym)mgU2-19/30
Z32
Other alias
HGNC (Hugo) SCARNA9
LocusID (NCBI) 619383
Atlas_Id 73027
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 93721514 and ends at 93721866 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA9   32566
Cards
Entrez_Gene (NCBI)SCARNA9  619383  small Cajal body-specific RNA 9
AliasesZ32; mgU2-19/30
GeneCards (Weizmann)SCARNA9
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:93721514-93721866 [Contig_View]  SCARNA9 [Vega]
TCGA cBioPortalSCARNA9
AceView (NCBI)SCARNA9
Genatlas (Paris)SCARNA9
WikiGenes619383
SOURCE (Princeton)SCARNA9
Genetics Home Reference (NIH)SCARNA9
Genomic and cartography
GoldenPath hg38 (UCSC)SCARNA9  -     chr11:93721514-93721866 +  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SCARNA9  -     11q21   [Description]    (hg19-Feb_2009)
EnsemblSCARNA9 - 11q21 [CytoView hg19]  SCARNA9 - 11q21 [CytoView hg38]
Mapping of homologs : NCBISCARNA9 [Mapview hg19]  SCARNA9 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AV737883 C19000 EH348052
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SCARNA9
Cluster EST : UnigeneHs.660668 [ NCBI ]
CGAP (NCI)Hs.660668
Gene ExpressionSCARNA9 [ NCBI-GEO ]   SCARNA9 [ EBI - ARRAY_EXPRESS ]   SCARNA9 [ SEEK ]   SCARNA9 [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)619383
GTEX Portal (Tissue expression)SCARNA9
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA9
DMDM Disease mutations619383
Blocks (Seattle)SCARNA9
Protein Interaction databases
BioGRIDSCARNA9
STRING (EMBL)SCARNA9
ZODIACSCARNA9
Ontologies - Pathways
Huge Navigator SCARNA9 [HugePedia]
snp3D : Map Gene to Disease619383
BioCentury BCIQSCARNA9
ClinGenSCARNA9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD619383
Chemical/Pharm GKB GenePA144596369
Clinical trialSCARNA9
Miscellaneous
canSAR (ICR)SCARNA9 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA9
EVEXSCARNA9
GoPubMedSCARNA9
iHOPSCARNA9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:40:03 CEST 2017

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