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SCARNA9L (small Cajal body-specific RNA 9-like)

Identity

Alias_namessmall Cajal body-specific RNA 9-like (retrotransposed)
Other alias-
HGNC (Hugo) SCARNA9L
LocusID (NCBI) 100158262
Atlas_Id 73028
Location Xp22.12  [Link to chromosome band Xp22]
Location_base_pair Starts at 20136066 and ends at 20136413 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA9L   33559
Cards
Entrez_Gene (NCBI)SCARNA9L  100158262  small Cajal body-specific RNA 9-like
Aliases
GeneCards (Weizmann)SCARNA9L
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:20136066-20136413 [Contig_View]  SCARNA9L [Vega]
TCGA cBioPortalSCARNA9L
AceView (NCBI)SCARNA9L
Genatlas (Paris)SCARNA9L
WikiGenes100158262
SOURCE (Princeton)SCARNA9L
Genetics Home Reference (NIH)SCARNA9L
Genomic and cartography
GoldenPath hg38 (UCSC)SCARNA9L  -     chrX:20136066-20136413 -  Xp22.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SCARNA9L  -     Xp22.12   [Description]    (hg19-Feb_2009)
EnsemblSCARNA9L - Xp22.12 [CytoView hg19]  SCARNA9L - Xp22.12 [CytoView hg38]
Mapping of homologs : NCBISCARNA9L [Mapview hg19]  SCARNA9L [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SCARNA9L
Gene ExpressionSCARNA9L [ NCBI-GEO ]   SCARNA9L [ EBI - ARRAY_EXPRESS ]   SCARNA9L [ SEEK ]   SCARNA9L [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA9L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100158262
GTEX Portal (Tissue expression)SCARNA9L
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA9L
DMDM Disease mutations100158262
Blocks (Seattle)SCARNA9L
Protein Interaction databases
BioGRIDSCARNA9L
STRING (EMBL)SCARNA9L
ZODIACSCARNA9L
Ontologies - Pathways
Huge Navigator SCARNA9L [HugePedia]
snp3D : Map Gene to Disease100158262
BioCentury BCIQSCARNA9L
ClinGenSCARNA9L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100158262
Chemical/Pharm GKB GenePA162402514
Clinical trialSCARNA9L
Miscellaneous
canSAR (ICR)SCARNA9L (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA9L
EVEXSCARNA9L
GoPubMedSCARNA9L
iHOPSCARNA9L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:37:19 CEST 2017

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