SCGB1D2 (secretoglobin family 1D member 2)

2003-06-01  

Identity

HGNC
SCGB1D2
LOCATION
11q12.3
LOCUSID
10647
ALIAS
LIPB,LPHB,LPNB
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10647
MIM: 615061
HGNC: 18396
Ensembl: ENSG00000124935

Variants:

dbSNP: 10647
ClinVar: 10647
TCGA: ENSG00000124935
COSMIC: SCGB1D2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000124935ENST00000244926O95969

Expression (GTEx)

0
50
100
150
200
250
300
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
171634112007Lipophilin B: A gene preferentially expressed in breast tissue and upregulated in breast cancer.9
125764452003Serum antibodies to lipophilin B detected in late stage breast cancer patients.6
186305032008Mammaglobin and lipophilin B expression in breast tumors and their lack of effect on breast cancer cell proliferation.5
156687872005Secretoglobins in the human pituitary: high expression of lipophilin B and its down-regulation in pituitary adenomas.4
246032862014Differential expression of secretoglobins in normal ovary and in ovarian carcinoma--overexpression of mammaglobin-1 is linked to tumor progression.4
238196522013Secretoglobin expression in ovarian carcinoma: lipophilin B gene upregulation as an independent marker of better prognosis.1

Citation

Dessen P

SCGB1D2 (secretoglobin family 1D member 2)

Atlas Genet Cytogenet Oncol Haematol. 2003-06-01

Online version: http://atlasgeneticsoncology.org/gene/42211/scgb1d2