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SDC4P (syndecan 4 pseudogene)

Identity

Other alias-
HGNC (Hugo) SDC4P
LocusID (NCBI) 376844
Atlas_Id 73063
Location 22q12.2  [Link to chromosome band 22q12]
Location_base_pair Starts at 30877277 and ends at 30877743 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SDC4P   18903
Cards
Entrez_Gene (NCBI)SDC4P  376844  syndecan 4 pseudogene
Aliases
GeneCards (Weizmann)SDC4P
Ensembl hg19 (Hinxton) [Gene_View]  chr22:30877277-30877743 [Contig_View]  SDC4P [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:30877277-30877743 [Contig_View]  SDC4P [Vega]
TCGA cBioPortalSDC4P
AceView (NCBI)SDC4P
Genatlas (Paris)SDC4P
WikiGenes376844
SOURCE (Princeton)SDC4P
Genetics Home Reference (NIH)SDC4P
Genomic and cartography
GoldenPath hg19 (UCSC)SDC4P  -     chr22:30877277-30877743 -  22q12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SDC4P  -     22q12.2   [Description]    (hg38-Dec_2013)
EnsemblSDC4P - 22q12.2 [CytoView hg19]  SDC4P - 22q12.2 [CytoView hg38]
Mapping of homologs : NCBISDC4P [Mapview hg19]  SDC4P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF520746
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011520 NW_004929430
Consensus coding sequences : CCDS (NCBI)SDC4P
Cluster EST : UnigeneHs.534651 [ NCBI ]
CGAP (NCI)Hs.534651
Gene ExpressionSDC4P [ NCBI-GEO ]   SDC4P [ EBI - ARRAY_EXPRESS ]   SDC4P [ SEEK ]   SDC4P [ MEM ]
Gene Expression Viewer (FireBrowse)SDC4P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)376844
GTEX Portal (Tissue expression)SDC4P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SDC4P
DMDM Disease mutations376844
Blocks (Seattle)SDC4P
IPIIPI00929246   
Protein Interaction databases
BioGRIDSDC4P
STRING (EMBL)SDC4P
ZODIACSDC4P
Ontologies - Pathways
Huge Navigator SDC4P [HugePedia]
snp3D : Map Gene to Disease376844
BioCentury BCIQSDC4P
ClinGenSDC4P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD376844
Chemical/Pharm GKB GenePA38751
Clinical trialSDC4P
Miscellaneous
canSAR (ICR)SDC4P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSDC4P
EVEXSDC4P
GoPubMedSDC4P
iHOPSDC4P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:42:36 CET 2017

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