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SDR16C6P (short chain dehydrogenase/reductase family 16C member 6, pseudogene)

Identity

Alias_namesSDR16C6
short chain dehydrogenase/reductase family 16C, member 6
Other alias
HGNC (Hugo) SDR16C6P
LocusID (NCBI) 442388
Atlas_Id 78164
Location 8q12.1  [Link to chromosome band 8q12]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SDR16C6P   35413
Cards
Entrez_Gene (NCBI)SDR16C6P  442388  short chain dehydrogenase/reductase family 16C member 6, pseudogene
AliasesSDR16C6
GeneCards (Weizmann)SDR16C6P
Ensembl hg19 (Hinxton)ENSG00000253542 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253542 [Gene_View]  - [Contig_View]  SDR16C6P [Vega]
ICGC DataPortalENSG00000253542
TCGA cBioPortalSDR16C6P
AceView (NCBI)SDR16C6P
Genatlas (Paris)SDR16C6P
WikiGenes442388
SOURCE (Princeton)SDR16C6P
Genetics Home Reference (NIH)SDR16C6P
Genomic and cartography
GoldenPath hg38 (UCSC)SDR16C6P  -  
GoldenPath hg19 (UCSC)SDR16C6P  -  
EnsemblSDR16C6P - [CytoView hg19]  SDR16C6P - [CytoView hg38]
Mapping of homologs : NCBISDR16C6P [Mapview hg19]  SDR16C6P [Mapview hg38]
Gene and transcription
Genbank (Entrez)DN831106
RefSeq transcript (Entrez)NM_001145251
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SDR16C6P
Cluster EST : UnigeneHs.632065 [ NCBI ]
CGAP (NCI)Hs.632065
Alternative Splicing GalleryENSG00000253542
Gene ExpressionSDR16C6P [ NCBI-GEO ]   SDR16C6P [ EBI - ARRAY_EXPRESS ]   SDR16C6P [ SEEK ]   SDR16C6P [ MEM ]
Gene Expression Viewer (FireBrowse)SDR16C6P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)442388
GTEX Portal (Tissue expression)SDR16C6P
Human Protein AtlasENSG00000253542-SDR16C6P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SDR16C6P
DMDM Disease mutations442388
Blocks (Seattle)SDR16C6P
Human Protein Atlas [tissue]ENSG00000253542-SDR16C6P [tissue]
Protein Interaction databases
FunCoupENSG00000253542
BioGRIDSDR16C6P
STRING (EMBL)SDR16C6P
ZODIACSDR16C6P
Ontologies - Pathways
Huge Navigator SDR16C6P [HugePedia]
snp3D : Map Gene to Disease442388
BioCentury BCIQSDR16C6P
ClinGenSDR16C6P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD442388
Chemical/Pharm GKB GenePA164725604
Clinical trialSDR16C6P
Miscellaneous
canSAR (ICR)SDR16C6P (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSDR16C6P
EVEXSDR16C6P
GoPubMedSDR16C6P
iHOPSDR16C6P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:57 CET 2017

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