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SEC1P (secretory blood group 1, pseudogene)

Identity

Other aliasSEC1
HGNC (Hugo) SEC1P
LocusID (NCBI) 653677
Atlas_Id 73086
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48638039 and ends at 48682245 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SEC1P   44149
Cards
Entrez_Gene (NCBI)SEC1P  653677  secretory blood group 1, pseudogene
AliasesSEC1
GeneCards (Weizmann)SEC1P
Ensembl hg19 (Hinxton)ENSG00000232871 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000232871 [Gene_View]  chr19:48638039-48682245 [Contig_View]  SEC1P [Vega]
ICGC DataPortalENSG00000232871
TCGA cBioPortalSEC1P
AceView (NCBI)SEC1P
Genatlas (Paris)SEC1P
WikiGenes653677
SOURCE (Princeton)SEC1P
Genetics Home Reference (NIH)SEC1P
Genomic and cartography
GoldenPath hg38 (UCSC)SEC1P  -     chr19:48638039-48682245 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEC1P  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblSEC1P - 19q13.33 [CytoView hg19]  SEC1P - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBISEC1P [Mapview hg19]  SEC1P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA922053 AK301046 AK301238 D87946 D87947
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEC1P
Cluster EST : UnigeneHs.443160 [ NCBI ]
CGAP (NCI)Hs.443160
Alternative Splicing GalleryENSG00000232871
Gene ExpressionSEC1P [ NCBI-GEO ]   SEC1P [ EBI - ARRAY_EXPRESS ]   SEC1P [ SEEK ]   SEC1P [ MEM ]
Gene Expression Viewer (FireBrowse)SEC1P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)653677
GTEX Portal (Tissue expression)SEC1P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SEC1P
DMDM Disease mutations653677
Blocks (Seattle)SEC1P
Human Protein AtlasENSG00000232871
Protein Interaction databases
FunCoupENSG00000232871
BioGRIDSEC1P
STRING (EMBL)SEC1P
ZODIACSEC1P
Ontologies - Pathways
Huge Navigator SEC1P [HugePedia]
snp3D : Map Gene to Disease653677
BioCentury BCIQSEC1P
ClinGenSEC1P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD653677
Clinical trialSEC1P
Miscellaneous
canSAR (ICR)SEC1P (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSEC1P
EVEXSEC1P
GoPubMedSEC1P
iHOPSEC1P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:37:27 CEST 2017

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