SEC22A (SEC22 homolog A, vesicle trafficking protein)

2016-10-01 Affiliation

Identity

HGNC

SEC22A

LOCATION

3q21.1

LOCUSID

26984

ALIAS

SEC22L2

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 26984
MIM: 612442
HGNC: 20260
Ensembl: ENSG00000121542

Variants:

dbSNP: 26984
ClinVar: 26984
TCGA: ENSG00000121542
COSMIC: SEC22A

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000121542	ENST00000309934	Q96IW7
ENSG00000121542	ENST00000466519	C9JZ27
ENSG00000121542	ENST00000466950	F8WAU7
ENSG00000121542	ENST00000473494	C9JNZ0
ENSG00000121542	ENST00000480631	C9JDJ8
ENSG00000121542	ENST00000481965	C9JR77
ENSG00000121542	ENST00000487572	C9JRY4
ENSG00000121542	ENST00000491366	C9J463
ENSG00000121542	ENST00000492595	Q96IW7

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Metabolism of proteins	REACTOME	R-HSA-392499
Post-translational protein modification	REACTOME	R-HSA-597592
Asparagine N-linked glycosylation	REACTOME	R-HSA-446203
Transport to the Golgi and subsequent modification	REACTOME	R-HSA-948021
ER to Golgi Anterograde Transport	REACTOME	R-HSA-199977
COPII (Coat Protein 2) Mediated Vesicle Transport	REACTOME	R-HSA-204005
Vesicle-mediated transport	REACTOME	R-HSA-5653656
Membrane Trafficking	REACTOME	R-HSA-199991

References

Pubmed ID	Year	Title	Citations
17499046	2007	The transport signal on Sec22 for packaging into COPII-coated vesicles is a conformational epitope.	63
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62

Citation

Dessen P

SEC22A (SEC22 homolog A, vesicle trafficking protein)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56252/sec22a