Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SEC24B-AS1 (SEC24B antisense RNA 1)

Identity

Alias_namesSEC24B antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)1/2-SBSRNA4
Other alias
HGNC (Hugo) SEC24B-AS1
LocusID (NCBI) 100533182
Atlas_Id 73093
Location 4q25  [Link to chromosome band 4q25]
Location_base_pair Starts at 109429963 and ends at 109433817 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SEC24B-AS1   44003
Cards
Entrez_Gene (NCBI)SEC24B-AS1  100533182  SEC24B antisense RNA 1
Aliases1/2-SBSRNA4
GeneCards (Weizmann)SEC24B-AS1
Ensembl hg19 (Hinxton)ENSG00000247950 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000247950 [Gene_View]  chr4:109429963-109433817 [Contig_View]  SEC24B-AS1 [Vega]
ICGC DataPortalENSG00000247950
TCGA cBioPortalSEC24B-AS1
AceView (NCBI)SEC24B-AS1
Genatlas (Paris)SEC24B-AS1
WikiGenes100533182
SOURCE (Princeton)SEC24B-AS1
Genetics Home Reference (NIH)SEC24B-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SEC24B-AS1  -     chr4:109429963-109433817 -  4q25   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEC24B-AS1  -     4q25   [Description]    (hg19-Feb_2009)
EnsemblSEC24B-AS1 - 4q25 [CytoView hg19]  SEC24B-AS1 - 4q25 [CytoView hg38]
Mapping of homologs : NCBISEC24B-AS1 [Mapview hg19]  SEC24B-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC009800
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEC24B-AS1
Cluster EST : UnigeneHs.518927 [ NCBI ]
CGAP (NCI)Hs.518927
Alternative Splicing GalleryENSG00000247950
Gene ExpressionSEC24B-AS1 [ NCBI-GEO ]   SEC24B-AS1 [ EBI - ARRAY_EXPRESS ]   SEC24B-AS1 [ SEEK ]   SEC24B-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SEC24B-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100533182
GTEX Portal (Tissue expression)SEC24B-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SEC24B-AS1
DMDM Disease mutations100533182
Blocks (Seattle)SEC24B-AS1
Human Protein AtlasENSG00000247950
Protein Interaction databases
FunCoupENSG00000247950
BioGRIDSEC24B-AS1
STRING (EMBL)SEC24B-AS1
ZODIACSEC24B-AS1
Ontologies - Pathways
Huge Navigator SEC24B-AS1 [HugePedia]
snp3D : Map Gene to Disease100533182
BioCentury BCIQSEC24B-AS1
ClinGenSEC24B-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533182
Clinical trialSEC24B-AS1
Miscellaneous
canSAR (ICR)SEC24B-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSEC24B-AS1
EVEXSEC24B-AS1
GoPubMedSEC24B-AS1
iHOPSEC24B-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:37:28 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.