Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SELENON (selenoprotein N)

Identity

Alias_namesRSMD1
MDRS1
SEPN1
rigid spine muscular dystrophy 1
selenoprotein N, 1
Alias_symbol (synonym)SELN
RSS
Other aliasCFTD
HGNC (Hugo) SELENON
LocusID (NCBI) 57190
Atlas_Id 56019
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 26126667 and ends at 26144713 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SELENON   15999
LRG (Locus Reference Genomic)LRG_857
Cards
Entrez_Gene (NCBI)SELENON  57190  selenoprotein N
AliasesCFTD; MDRS1; RSMD1; RSS; 
SELN; SEPN1
GeneCards (Weizmann)SELENON
Ensembl hg19 (Hinxton)ENSG00000162430 [Gene_View]  chr1:26126667-26144713 [Contig_View]  SELENON [Vega]
Ensembl hg38 (Hinxton)ENSG00000162430 [Gene_View]  chr1:26126667-26144713 [Contig_View]  SELENON [Vega]
ICGC DataPortalENSG00000162430
TCGA cBioPortalSELENON
AceView (NCBI)SELENON
Genatlas (Paris)SELENON
WikiGenes57190
SOURCE (Princeton)SELENON
Genetics Home Reference (NIH)SELENON
Genomic and cartography
GoldenPath hg19 (UCSC)SELENON  -     chr1:26126667-26144713 +  1p36.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SELENON  -     1p36.11   [Description]    (hg38-Dec_2013)
EnsemblSELENON - 1p36.11 [CytoView hg19]  SELENON - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBISELENON [Mapview hg19]  SELENON [Mapview hg38]
OMIM255310   602771   606210   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_020451 NM_206926
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SELENON
Cluster EST : UnigeneHs.323396 [ NCBI ]
CGAP (NCI)Hs.323396
Alternative Splicing GalleryENSG00000162430
Gene ExpressionSELENON [ NCBI-GEO ]   SELENON [ EBI - ARRAY_EXPRESS ]   SELENON [ SEEK ]   SELENON [ MEM ]
Gene Expression Viewer (FireBrowse)SELENON [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)57190
GTEX Portal (Tissue expression)SELENON
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SELENON
DMDM Disease mutations57190
Blocks (Seattle)SELENON
Human Protein AtlasENSG00000162430
HPRD05867
IPIIPI00413784   IPI00455204   IPI01012496   
Protein Interaction databases
FunCoupENSG00000162430
BioGRIDSELENON
STRING (EMBL)SELENON
ZODIACSELENON
Ontologies - Pathways
Huge Navigator SELENON [HugePedia]
snp3D : Map Gene to Disease57190
BioCentury BCIQSELENON
ClinGenSELENON
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57190
Chemical/Pharm GKB GenePA38079
Clinical trialSELENON
Miscellaneous
canSAR (ICR)SELENON (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSELENON
EVEXSELENON
GoPubMedSELENON
iHOPSELENON
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:18:42 CEST 2017

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