Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SELENOW (selenoprotein W)

Identity

Alias_namesSEPW1
selenoprotein W
Alias_symbol (synonym)SELW
Other aliasselW
HGNC (Hugo) SELENOW
LocusID (NCBI) 6415
Atlas_Id 56195
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48281842 and ends at 48287943 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SELENOW   10752
Cards
Entrez_Gene (NCBI)SELENOW  6415  selenoprotein W
AliasesSEPW1; selW
GeneCards (Weizmann)SELENOW
Ensembl hg19 (Hinxton)ENSG00000178980 [Gene_View]  chr19:48281842-48287943 [Contig_View]  SELENOW [Vega]
Ensembl hg38 (Hinxton)ENSG00000178980 [Gene_View]  chr19:48281842-48287943 [Contig_View]  SELENOW [Vega]
ICGC DataPortalENSG00000178980
TCGA cBioPortalSELENOW
AceView (NCBI)SELENOW
Genatlas (Paris)SELENOW
WikiGenes6415
SOURCE (Princeton)SELENOW
Genetics Home Reference (NIH)SELENOW
Genomic and cartography
GoldenPath hg19 (UCSC)SELENOW  -     chr19:48281842-48287943 +  19q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SELENOW  -     19q13.33   [Description]    (hg38-Dec_2013)
EnsemblSELENOW - 19q13.33 [CytoView hg19]  SELENOW - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBISELENOW [Mapview hg19]  SELENOW [Mapview hg38]
OMIM603235   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_003009
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SELENOW
Cluster EST : UnigeneHs.631549 [ NCBI ]
CGAP (NCI)Hs.631549
Alternative Splicing GalleryENSG00000178980
Gene ExpressionSELENOW [ NCBI-GEO ]   SELENOW [ EBI - ARRAY_EXPRESS ]   SELENOW [ SEEK ]   SELENOW [ MEM ]
Gene Expression Viewer (FireBrowse)SELENOW [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6415
GTEX Portal (Tissue expression)SELENOW
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SELENOW
DMDM Disease mutations6415
Blocks (Seattle)SELENOW
Human Protein AtlasENSG00000178980
HPRD08377
IPIIPI00966892   
Protein Interaction databases
FunCoupENSG00000178980
BioGRIDSELENOW
STRING (EMBL)SELENOW
ZODIACSELENOW
Ontologies - Pathways
Huge Navigator SELENOW [HugePedia]
snp3D : Map Gene to Disease6415
BioCentury BCIQSELENOW
ClinGenSELENOW
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6415
Chemical/Pharm GKB GenePA35673
Clinical trialSELENOW
Miscellaneous
canSAR (ICR)SELENOW (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSELENOW
EVEXSELENOW
GoPubMedSELENOW
iHOPSELENOW
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:26:36 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.