SEMA4F (ssemaphorin 4F)

2003-05-01  

Identity

HGNC
SEMA4F
LOCATION
2p13.1
LOCUSID
10505
ALIAS
M-SEMA,PRO2353,S4F,SEMAM,SEMAW,m-Sema-M
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 10505
MIM: 603706
HGNC: 10734
Ensembl: ENSG00000135622

Variants:

dbSNP: 10505
ClinVar: 10505
TCGA: ENSG00000135622
COSMIC: SEMA4F

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000135622ENST00000339773O95754
ENSG00000135622ENST00000357877O95754
ENSG00000135622ENST00000416236F8WD61
ENSG00000135622ENST00000420077F8WCP8
ENSG00000135622ENST00000434486C9K0A1
ENSG00000135622ENST00000446927B7Z931
ENSG00000135622ENST00000453930C9JKW7
ENSG00000135622ENST00000458114F8WEH3
ENSG00000135622ENST00000611975A0A087WYZ7

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Axon guidanceKEGGko04360
Axon guidanceKEGGhsa04360

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
retina
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
190568852008NF1 loss disrupts Schwann cell-axonal interactions: a novel role for semaphorin 4F.18
119013582002Fine mapping of the chromosome 2p12-16 dyslexia susceptibility locus: quantitative association analysis and positional candidate genes SEMA4F and OTX1.7
219252462011Semaphorin-plexin signalling genes associated with human breast tumourigenesis.5

Citation

Dessen P

SEMA4F (ssemaphorin 4F)

Atlas Genet Cytogenet Oncol Haematol. 2003-05-01

Online version: http://atlasgeneticsoncology.org/gene/42256/sema4f