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SEMA6A-AS1 (SEMA6A antisense RNA 1)

Identity

Other aliasCTB-118N6.3
HGNC (Hugo) SEMA6A-AS1
LocusID (NCBI) 101927233
Atlas_Id 73113
Location 5q23.1  [Link to chromosome band 5q23]
Location_base_pair Starts at 116447498 and ends at 116471673 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SEMA6A-AS1   51110
Cards
Entrez_Gene (NCBI)SEMA6A-AS1  101927233  SEMA6A antisense RNA 1
AliasesCTB-118N6.3
GeneCards (Weizmann)SEMA6A-AS1
Ensembl hg19 (Hinxton)ENSG00000248445 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000248445 [Gene_View]  chr5:116447498-116471673 [Contig_View]  SEMA6A-AS1 [Vega]
ICGC DataPortalENSG00000248445
TCGA cBioPortalSEMA6A-AS1
AceView (NCBI)SEMA6A-AS1
Genatlas (Paris)SEMA6A-AS1
WikiGenes101927233
SOURCE (Princeton)SEMA6A-AS1
Genetics Home Reference (NIH)SEMA6A-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SEMA6A-AS1  -     chr5:116447498-116471673 +  5q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEMA6A-AS1  -     5q23.1   [Description]    (hg19-Feb_2009)
EnsemblSEMA6A-AS1 - 5q23.1 [CytoView hg19]  SEMA6A-AS1 - 5q23.1 [CytoView hg38]
Mapping of homologs : NCBISEMA6A-AS1 [Mapview hg19]  SEMA6A-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CD300011
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEMA6A-AS1
Cluster EST : UnigeneHs.732850 [ NCBI ]
CGAP (NCI)Hs.732850
Alternative Splicing GalleryENSG00000248445
Gene ExpressionSEMA6A-AS1 [ NCBI-GEO ]   SEMA6A-AS1 [ EBI - ARRAY_EXPRESS ]   SEMA6A-AS1 [ SEEK ]   SEMA6A-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SEMA6A-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927233
GTEX Portal (Tissue expression)SEMA6A-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SEMA6A-AS1
DMDM Disease mutations101927233
Blocks (Seattle)SEMA6A-AS1
Human Protein AtlasENSG00000248445
Protein Interaction databases
FunCoupENSG00000248445
BioGRIDSEMA6A-AS1
STRING (EMBL)SEMA6A-AS1
ZODIACSEMA6A-AS1
Ontologies - Pathways
Huge Navigator SEMA6A-AS1 [HugePedia]
snp3D : Map Gene to Disease101927233
BioCentury BCIQSEMA6A-AS1
ClinGenSEMA6A-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927233
Clinical trialSEMA6A-AS1
Miscellaneous
canSAR (ICR)SEMA6A-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSEMA6A-AS1
EVEXSEMA6A-AS1
GoPubMedSEMA6A-AS1
iHOPSEMA6A-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:37:32 CEST 2017

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