SEMA6C (semaphorin 6C)

2014-11-01 Affiliation

Identity

HGNC

SEMA6C

LOCATION

1q21.3

LOCUSID

10500

ALIAS

SEMAY,m-SemaY,m-SemaY2

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 10500
MIM: 609294
HGNC: 10740
Ensembl: ENSG00000143434

Variants:

dbSNP: 10500
ClinVar: 10500
TCGA: ENSG00000143434
COSMIC: SEMA6C

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000143434	ENST00000341697	Q9H3T2
ENSG00000143434	ENST00000368912	Q9H3T2
ENSG00000143434	ENST00000368913	Q9H3T2
ENSG00000143434	ENST00000368914	Q9H3T2
ENSG00000143434	ENST00000613223	A0A087WYX3
ENSG00000143434	ENST00000621728	A0A087X0A5

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Pathways

Pathway	Source	External ID
Axon guidance	KEGG	ko04360
Axon guidance	KEGG	hsa04360

References

Pubmed ID	Year	Title	Citations
19054571	2009	Polymorphisms in genes involved in neurodevelopment may be associated with altered brain morphology in schizophrenia: preliminary evidence.	18
12110693	2002	Identification, characterization, and functional study of the two novel human members of the semaphorin gene family.	17

Citation

Dessen P

SEMA6C (semaphorin 6C)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73114/sema6c