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SEMG1 (semenogelin 1)

Identity

Alias (NCBI)CT103
SEMG
SGI
dJ172H20.2
HGNC (Hugo) SEMG1
HGNC Alias symbCT103
HGNC Alias namesemen coagulating protein
 cancer/testis antigen 103
HGNC Previous nameSEMG
HGNC Previous namesemenogelin I
LocusID (NCBI) 6406
Atlas_Id 46426
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 45207033 and ends at 45209768 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SEMG1   10742
Cards
Entrez_Gene (NCBI)SEMG1    semenogelin 1
AliasesCT103; SEMG; SGI; dJ172H20.2
GeneCards (Weizmann)SEMG1
Ensembl hg19 (Hinxton)ENSG00000124233 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124233 [Gene_View]  ENSG00000124233 [Sequence]  chr20:45207033-45209768 [Contig_View]  SEMG1 [Vega]
ICGC DataPortalENSG00000124233
TCGA cBioPortalSEMG1
AceView (NCBI)SEMG1
Genatlas (Paris)SEMG1
SOURCE (Princeton)SEMG1
Genetics Home Reference (NIH)SEMG1
Genomic and cartography
GoldenPath hg38 (UCSC)SEMG1  -     chr20:45207033-45209768 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEMG1  -     20q13.12   [Description]    (hg19-Feb_2009)
GoldenPathSEMG1 - 20q13.12 [CytoView hg19]  SEMG1 - 20q13.12 [CytoView hg38]
ImmunoBaseENSG00000124233
genome Data Viewer NCBISEMG1 [Mapview hg19]  
OMIM182140   
Gene and transcription
Genbank (Entrez)AA687874 BC005229 BC007096 BC011442 BC055416
RefSeq transcript (Entrez)NM_003007 NM_198139
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEMG1
Alternative Splicing GalleryENSG00000124233
Gene ExpressionSEMG1 [ NCBI-GEO ]   SEMG1 [ EBI - ARRAY_EXPRESS ]   SEMG1 [ SEEK ]   SEMG1 [ MEM ]
Gene Expression Viewer (FireBrowse)SEMG1 [ Firebrowse - Broad ]
GenevisibleExpression of SEMG1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6406
GTEX Portal (Tissue expression)SEMG1
Human Protein AtlasENSG00000124233-SEMG1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SEMG1
Blocks (Seattle)SEMG1
Human Protein Atlas [tissue]ENSG00000124233-SEMG1 [tissue]
HPRD01641
IPIIPI00023020   IPI00414684   
Protein Interaction databases
BioGRIDSEMG1
STRING (EMBL)SEMG1
ZODIACSEMG1
Ontologies - Pathways
Litterature
PubMed81 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSEMG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:44:59 CET 2021

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