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SENP3-EIF4A1 (SENP3-EIF4A1 readthrough (NMD candidate))

Identity

Other alias-
HGNC (Hugo) SENP3-EIF4A1
LocusID (NCBI) 100533955
Atlas_Id 73117
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7561992 and ends at 7579006 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SENP3-EIF4A1   49182
Cards
Entrez_Gene (NCBI)SENP3-EIF4A1  100533955  SENP3-EIF4A1 readthrough (NMD candidate)
Aliases
GeneCards (Weizmann)SENP3-EIF4A1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:7561992-7579006 [Contig_View]  SENP3-EIF4A1 [Vega]
TCGA cBioPortalSENP3-EIF4A1
AceView (NCBI)SENP3-EIF4A1
Genatlas (Paris)SENP3-EIF4A1
WikiGenes100533955
SOURCE (Princeton)SENP3-EIF4A1
Genetics Home Reference (NIH)SENP3-EIF4A1
Genomic and cartography
GoldenPath hg38 (UCSC)SENP3-EIF4A1  -     chr17:7561992-7579006 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SENP3-EIF4A1  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblSENP3-EIF4A1 - 17p13.1 [CytoView hg19]  SENP3-EIF4A1 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBISENP3-EIF4A1 [Mapview hg19]  SENP3-EIF4A1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC032613
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SENP3-EIF4A1
Cluster EST : UnigeneHs.129673 [ NCBI ]
CGAP (NCI)Hs.129673
Gene ExpressionSENP3-EIF4A1 [ NCBI-GEO ]   SENP3-EIF4A1 [ EBI - ARRAY_EXPRESS ]   SENP3-EIF4A1 [ SEEK ]   SENP3-EIF4A1 [ MEM ]
Gene Expression Viewer (FireBrowse)SENP3-EIF4A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100533955
GTEX Portal (Tissue expression)SENP3-EIF4A1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SENP3-EIF4A1
DMDM Disease mutations100533955
Blocks (Seattle)SENP3-EIF4A1
Protein Interaction databases
BioGRIDSENP3-EIF4A1
STRING (EMBL)SENP3-EIF4A1
ZODIACSENP3-EIF4A1
Ontologies - Pathways
Huge Navigator SENP3-EIF4A1 [HugePedia]
snp3D : Map Gene to Disease100533955
BioCentury BCIQSENP3-EIF4A1
ClinGenSENP3-EIF4A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533955
Clinical trialSENP3-EIF4A1
Miscellaneous
canSAR (ICR)SENP3-EIF4A1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSENP3-EIF4A1
EVEXSENP3-EIF4A1
GoPubMedSENP3-EIF4A1
iHOPSENP3-EIF4A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:26:46 CET 2017

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