Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SEPT12 (-)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 124404
Atlas_Id 53651
Location -  [Link to chromosome band ]
Location_base_pair Starts at 4777614 and ends at 4788521 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)SEPT12  124404  -
Aliases
GeneCards (Weizmann)SEPT12
Ensembl hg19 (Hinxton)ENSG00000140623 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000140623 [Gene_View]  ENSG00000140623 [Sequence]  chr16:4777614-4788521 [Contig_View]  SEPT12 [Vega]
ICGC DataPortalENSG00000140623
TCGA cBioPortalSEPT12
AceView (NCBI)SEPT12
Genatlas (Paris)SEPT12
WikiGenes124404
SOURCE (Princeton)SEPT12
Genetics Home Reference (NIH)SEPT12
Genomic and cartography
GoldenPath hg38 (UCSC)SEPT12  -     chr16:4777614-4788521 -  -   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEPT12  -     -   [Description]    (hg19-Feb_2009)
GoldenPathSEPT12 - - [CytoView hg19]  SEPT12 - - [CytoView hg38]
ImmunoBaseENSG00000140623
Mapping of homologs : NCBISEPT12 [Mapview hg19]  SEPT12 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEPT12
Alternative Splicing GalleryENSG00000140623
Gene ExpressionSEPT12 [ NCBI-GEO ]   SEPT12 [ EBI - ARRAY_EXPRESS ]   SEPT12 [ SEEK ]   SEPT12 [ MEM ]
Gene Expression Viewer (FireBrowse)SEPT12 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)124404
GTEX Portal (Tissue expression)SEPT12
Human Protein AtlasENSG00000140623-SEPT12 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SEPT12
DMDM Disease mutations124404
Blocks (Seattle)SEPT12
Human Protein Atlas [tissue]ENSG00000140623-SEPT12 [tissue]
HPRD08061
IPIIPI00293544   IPI00745407   
Protein Interaction databases
FunCoupENSG00000140623
BioGRIDSEPT12
STRING (EMBL)SEPT12
ZODIACSEPT12
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease124404
BioCentury BCIQSEPT12
ClinGenSEPT12
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD124404
Clinical trialSEPT12
Miscellaneous
canSAR (ICR)SEPT12 (select the gene name)
DataMed IndexSEPT12
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSEPT12
EVEXSEPT12
GoPubMedSEPT12
iHOPSEPT12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 26 18:28:08 CEST 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.