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SEPT14 (septin 14)

Identity

Alias_symbol (synonym)FLJ44060
Other alias-
HGNC (Hugo) 14-Sep
LocusID (NCBI) 346288
Atlas_Id 73123
Location 7p11.2  [Link to chromosome band 7p11]
Location_base_pair Starts at 55793544 and ends at 55862789 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
COBL (7p12.1) / SEPT14 (7p11.2)EGFR (7p11.2) / SEPT14 (7p11.2)LANCL2 (7p11.2) / SEPT14 (7p11.2)
RP11-15K19.2 () / SEPT14 (7p11.2)SEPT14 (7p11.2) / UPP1 (7p12.3)LANCL2 SEPT14
EGFR SEPT14COBL SEPT14RP11-15K19.2 SEPT14

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)14-Sep   33280
Cards
Entrez_Gene (NCBI)SEPT14  346288  septin 14
Aliases
GeneCards (Weizmann)SEPT14
Ensembl hg19 (Hinxton)ENSG00000154997 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000154997 [Gene_View]  chr7:55793544-55862789 [Contig_View]  SEPT14 [Vega]
ICGC DataPortalENSG00000154997
TCGA cBioPortalSEPT14
AceView (NCBI)SEPT14
Genatlas (Paris)SEPT14
WikiGenes346288
SOURCE (Princeton)SEPT14
Genetics Home Reference (NIH)SEPT14
Genomic and cartography
GoldenPath hg38 (UCSC)SEPT14  -     chr7:55793544-55862789 -  7p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEPT14  -     7p11.2   [Description]    (hg19-Feb_2009)
EnsemblSEPT14 - 7p11.2 [CytoView hg19]  SEPT14 - 7p11.2 [CytoView hg38]
Mapping of homologs : NCBISEPT14 [Mapview hg19]  SEPT14 [Mapview hg38]
OMIM612140   
Gene and transcription
Genbank (Entrez)AI337138 AK126048 AK301928 AL041480 BC146357
RefSeq transcript (Entrez)NM_207366
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEPT14
Cluster EST : UnigeneHs.453629 [ NCBI ]
CGAP (NCI)Hs.453629
Alternative Splicing GalleryENSG00000154997
Gene ExpressionSEPT14 [ NCBI-GEO ]   SEPT14 [ EBI - ARRAY_EXPRESS ]   SEPT14 [ SEEK ]   SEPT14 [ MEM ]
Gene Expression Viewer (FireBrowse)SEPT14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)346288
GTEX Portal (Tissue expression)SEPT14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZU15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZU15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZU15
Splice isoforms : SwissVarQ6ZU15
PhosPhoSitePlusQ6ZU15
Domaine pattern : Prosite (Expaxy)G_SEPTIN (PS51719)   
Domains : Interpro (EBI)G_SEPTIN_dom    P-loop_NTPase    Septin   
Domain families : Pfam (Sanger)Septin (PF00735)   
Domain families : Pfam (NCBI)pfam00735   
Conserved Domain (NCBI)SEPT14
DMDM Disease mutations346288
Blocks (Seattle)SEPT14
SuperfamilyQ6ZU15
Human Protein AtlasENSG00000154997
Peptide AtlasQ6ZU15
HPRD16972
IPIIPI00248126   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZU15
IntAct (EBI)Q6ZU15
FunCoupENSG00000154997
BioGRIDSEPT14
STRING (EMBL)SEPT14
ZODIACSEPT14
Ontologies - Pathways
QuickGOQ6ZU15
Ontology : AmiGOprotein binding  GTP binding  cytoplasm  cytoskeleton  cell cycle  cell division  
Ontology : EGO-EBIprotein binding  GTP binding  cytoplasm  cytoskeleton  cell cycle  cell division  
NDEx NetworkSEPT14
Atlas of Cancer Signalling NetworkSEPT14
Wikipedia pathwaysSEPT14
Orthology - Evolution
OrthoDB346288
GeneTree (enSembl)ENSG00000154997
Phylogenetic Trees/Animal Genes : TreeFam14-Sep
HOVERGENQ6ZU15
HOGENOMQ6ZU15
Homologs : HomoloGeneSEPT14
Homology/Alignments : Family Browser (UCSC)SEPT14
Gene fusions - Rearrangements
Fusion: TCGALANCL2 SEPT14
Fusion: TCGAEGFR SEPT14
Fusion: TCGACOBL SEPT14
Fusion: TCGARP11-15K19.2 SEPT14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSEPT14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SEPT14
dbVarSEPT14
ClinVarSEPT14
1000_GenomesSEPT14 
Exome Variant ServerSEPT14
ExAC (Exome Aggregation Consortium)SEPT14 (select the gene name)
Genetic variants : HAPMAP346288
Genomic Variants (DGV)SEPT14 [DGVbeta]
DECIPHERSEPT14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSEPT14 
Mutations
ICGC Data Portal14-Sep 
TCGA Data Portal14-Sep 
Broad Tumor Portal14-Sep
OASIS Portal14-Sep [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSEPT14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMD14-Sep
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SEPT14
DgiDB (Drug Gene Interaction Database)SEPT14
DoCM (Curated mutations)SEPT14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SEPT14 (select a term)
intoGenSEPT14
Cancer3DSEPT14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612140   
Orphanet19649    19650   
MedgenSEPT14
Genetic Testing Registry SEPT14
NextProtQ6ZU15 [Medical]
TSGene346288
GENETestsSEPT14
Target ValidationSEPT14
Huge Navigator 14-Sep [HugePedia]
snp3D : Map Gene to Disease346288
BioCentury BCIQSEPT14
ClinGenSEPT14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD346288
Chemical/Pharm GKB GenePA162402917
Clinical trialSEPT14
Miscellaneous
canSAR (ICR)SEPT14 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSEPT14
EVEXSEPT14
GoPubMedSEPT14
iHOPSEPT14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:37:34 CEST 2017

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