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SEPT4-AS1 (SEPT4 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SEPT4-AS1
LocusID (NCBI) 101927688
Atlas_Id 73124
Location 17q22  [Link to chromosome band 17q22]
Location_base_pair Starts at 58519837 and ends at 58556925 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SEPT4-AS1   51345
Cards
Entrez_Gene (NCBI)SEPT4-AS1  101927688  SEPT4 antisense RNA 1
Aliases
GeneCards (Weizmann)SEPT4-AS1
Ensembl hg19 (Hinxton)ENSG00000264672 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264672 [Gene_View]  chr17:58519837-58556925 [Contig_View]  SEPT4-AS1 [Vega]
ICGC DataPortalENSG00000264672
TCGA cBioPortalSEPT4-AS1
AceView (NCBI)SEPT4-AS1
Genatlas (Paris)SEPT4-AS1
WikiGenes101927688
SOURCE (Princeton)SEPT4-AS1
Genetics Home Reference (NIH)SEPT4-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SEPT4-AS1  -     chr17:58519837-58556925 +  17q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEPT4-AS1  -     17q22   [Description]    (hg19-Feb_2009)
EnsemblSEPT4-AS1 - 17q22 [CytoView hg19]  SEPT4-AS1 - 17q22 [CytoView hg38]
Mapping of homologs : NCBISEPT4-AS1 [Mapview hg19]  SEPT4-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CK429595
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEPT4-AS1
Cluster EST : UnigeneHs.660034 [ NCBI ]
CGAP (NCI)Hs.660034
Alternative Splicing GalleryENSG00000264672
Gene ExpressionSEPT4-AS1 [ NCBI-GEO ]   SEPT4-AS1 [ EBI - ARRAY_EXPRESS ]   SEPT4-AS1 [ SEEK ]   SEPT4-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SEPT4-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927688
GTEX Portal (Tissue expression)SEPT4-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SEPT4-AS1
DMDM Disease mutations101927688
Blocks (Seattle)SEPT4-AS1
Human Protein AtlasENSG00000264672
Protein Interaction databases
FunCoupENSG00000264672
BioGRIDSEPT4-AS1
STRING (EMBL)SEPT4-AS1
ZODIACSEPT4-AS1
Ontologies - Pathways
Huge Navigator SEPT4-AS1 [HugePedia]
snp3D : Map Gene to Disease101927688
BioCentury BCIQSEPT4-AS1
ClinGenSEPT4-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927688
Clinical trialSEPT4-AS1
Miscellaneous
canSAR (ICR)SEPT4-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSEPT4-AS1
EVEXSEPT4-AS1
GoPubMedSEPT4-AS1
iHOPSEPT4-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:40:23 CEST 2017

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