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SEPTIN4 (septin 4)

Identity

Alias (NCBI)ARTS
BRADEION
C17orf47
CE5B3
H5
MART
PNUTL2
SEP4
SEPT4
hCDCREL-2
hucep-7
HGNC (Hugo) SEPTIN4
HGNC Alias symbH5
CE5B3
hucep-7
ARTS
hCDCREL-2
MART
FLJ40121
HGNC Alias namebradeoin
 septin-M
HGNC Previous namePNUTL2
 C17orf47
 SEPT4
HGNC Previous namepeanut-like 2 (Drosophila)
 chromosome 17 open reading frame 47
LocusID (NCBI) 5414
Atlas_Id 46050
Location 17q22  [Link to chromosome band 17q22]
Location_base_pair Starts at 58520250 and ends at 58532084 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DYNLL2 17q22 / SEPT4 17q22SUPT4H1 17q22 / SEPT4 17q22WDR45L SEPT4 17q22
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)SEPTIN4   9165
Cards
Entrez_Gene (NCBI)SEPTIN4    septin 4
AliasesARTS; BRADEION; C17orf47; CE5B3; 
H5; MART; PNUTL2; SEP4; SEPT4; hCDCREL-2; hucep-7
GeneCards (Weizmann)SEPTIN4
Ensembl hg19 (Hinxton)ENSG00000108387 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000108387 [Gene_View]  ENSG00000108387 [Sequence]  chr17:58520250-58532084 [Contig_View]  SEPTIN4 [Vega]
ICGC DataPortalENSG00000108387
TCGA cBioPortalSEPTIN4
AceView (NCBI)SEPTIN4
Genatlas (Paris)SEPTIN4
SOURCE (Princeton)SEPTIN4
Genetics Home Reference (NIH)SEPTIN4
Genomic and cartography
GoldenPath hg38 (UCSC)SEPTIN4  -     chr17:58520250-58532084 -  17q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SEPTIN4  -     17q22   [Description]    (hg19-Feb_2009)
GoldenPathSEPTIN4 - 17q22 [CytoView hg19]  SEPTIN4 - 17q22 [CytoView hg38]
ImmunoBaseENSG00000108387
genome Data Viewer NCBISEPTIN4 [Mapview hg19]  
OMIM603696   
Gene and transcription
Genbank (Entrez)AB002110 AB008753 AB010642 AF035811 AF073312
RefSeq transcript (Entrez)NM_001038704 NM_001198713 NM_001256782 NM_001256822 NM_001363803 NM_001368771 NM_001368772 NM_004574 NM_080415 NM_080416 NM_080417
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SEPTIN4
Alternative Splicing GalleryENSG00000108387
Gene ExpressionSEPTIN4 [ NCBI-GEO ]   SEPTIN4 [ EBI - ARRAY_EXPRESS ]   SEPTIN4 [ SEEK ]   SEPTIN4 [ MEM ]
Gene Expression Viewer (FireBrowse)SEPTIN4 [ Firebrowse - Broad ]
GenevisibleExpression of SEPTIN4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)5414
GTEX Portal (Tissue expression)SEPTIN4
Human Protein AtlasENSG00000108387-SEPTIN4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SEPTIN4
Blocks (Seattle)SEPTIN4
Human Protein Atlas [tissue]ENSG00000108387-SEPTIN4 [tissue]
HPRD04738
IPIIPI00939537   IPI00183878   IPI00952695   IPI00011589   IPI00953305   IPI00026430   IPI00044767   IPI00956132   
Protein Interaction databases
BioGRIDSEPTIN4
STRING (EMBL)SEPTIN4
ZODIACSEPTIN4
Ontologies - Pathways
Litterature
PubMed64 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSEPTIN4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:45:03 CET 2021

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