SEPX1 (selenoprotein X, 1)

Identity

Other names	HSPC270
	MGC3344
	MSRB1
	SELR
	SELX
HGNC	SEPX1
Location	16p13.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SEPX1   14133
Entrez_Gene	SEPX1  51734  selenoprotein X, 1
	Cards
GeneCards	SEPX1
Ensembl	SEPX1 [Search_View]   ENSG00000198736 [Gene_View]
Genatlas	SEPX1
GeneLynx	SEPX1
eGenome	SEPX1
euGene	51734
	Genomic and cartography
GoldenPath	SEPX1  -  16p13.3   chr16:1928235-1933295 -  16p13.3   [Description]    (hg18-March_2006)
Ensembl	SEPX1 - 16p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SEPX1
	Gene and transcription
Genbank	AF161388 [ ENTREZ ]
Genbank	AF166124 [ ENTREZ ]
Genbank	AF187272 [ ENTREZ ]
Genbank	AK026128 [ ENTREZ ]
Genbank	BC003127 [ ENTREZ ]
RefSeq	NM_016332 [ SRS ]    NM_016332 [ ENTREZ ]
RefSeq	AC_000059 [ SRS ]    AC_000059 [ ENTREZ ]
RefSeq	AC_000148 [ SRS ]    AC_000148 [ ENTREZ ]
RefSeq	NC_000016 [ SRS ]    NC_000016 [ ENTREZ ]
RefSeq	NT_037887 [ SRS ]    NT_037887 [ ENTREZ ]
RefSeq	NW_001838339 [ SRS ]    NW_001838339 [ ENTREZ ]
RefSeq	NW_926018 [ SRS ]    NW_926018 [ ENTREZ ]
AceView	SEPX1 AceView - NCBI
Unigene	Hs.655346 [ SRS ]    Hs.655346 [ NCBI ]     HS655346 [ spliceNest ]
Fast-db	1583 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9NZV6 [ SRS]    Q9NZV6 [ EXPASY ]     Q9NZV6 [ INTERPRO ]     Q9NZV6 [ UNIPROT ]
Interpro	IPR002579 MsrB [ SRS ]    IPR002579 MsrB [ EBI ]
CluSTr	Q9NZV6
Pfam	PF01641 SelR [ SRS ]    PF01641 SelR [ Sanger ]    pfam01641 [ NCBI-CDD ]
Prodom	PD004057 DUF25[INRA-Toulouse]
Prodom	Q9NZV6 MSRB1_HUMAN [ Domain structure ]   Q9NZV6 MSRB1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q9NZV6
HPRD	12095
	Protein Interaction databases
DIP	Q9NZV6
IntAct	Q9NZV6
	Polymorphism : SNP, mutations, diseases
OMIM	606216    [ map ]
GENECLINICS	606216
SNP	SEPX1 [dbSNP-NCBI]
SNP	NM_016332 [SNP-NCI]
SNP	SEPX1 [GeneSNPs - Utah]  SEPX1] [HGBASE - SRS]
HAPMAP	SEPX1 [HAPMAP]
HGMD	SEPX1
	General knowledge
Family Browser	SEPX1 [UCSC Family Browser]
SOURCE	NM_016332
SMD	Hs.655346
SAGE	Hs.655346
Enzyme	1.8.4.- [ Enzyme-Expasy ]   1.8.4.- [ Enzyme-SRS ]   1.8.4.- [ IntEnz-EBI ]   1.8.4.- [ BRENDA ]   1.8.4.- [ KEGG ]   1.8.4.- [ WIT ]
GO	cellular_component [Amigo]  cellular_component
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	peptide-methionine-(S)-S-oxide reductase activity [Amigo]  peptide-methionine-(S)-S-oxide reductase activity
GO	zinc ion binding [Amigo]  zinc ion binding
GO	selenium binding [Amigo]  selenium binding
GO	oxidoreductase activity [Amigo]  oxidoreductase activity
GO	protein repair [Amigo]  protein repair
GO	metal ion binding [Amigo]  metal ion binding
GO	oxidation reduction [Amigo]  oxidation reduction
PubGene	SEPX1
TreeFam	SEPX1
CTD	51734 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SEPX1 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:31:19 2008