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SERPINA11 (serpin family A member 11)

Identity

Alias_namesserine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11
Other alias-
HGNC (Hugo) SERPINA11
LocusID (NCBI) 256394
Atlas_Id 73139
Location 14q32.13  [Link to chromosome band 14q32]
Location_base_pair Starts at 94442464 and ends at 94452785 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SERPINA11   19193
Cards
Entrez_Gene (NCBI)SERPINA11  256394  serpin family A member 11
Aliases
GeneCards (Weizmann)SERPINA11
Ensembl hg19 (Hinxton)ENSG00000186910 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186910 [Gene_View]  chr14:94442464-94452785 [Contig_View]  SERPINA11 [Vega]
ICGC DataPortalENSG00000186910
TCGA cBioPortalSERPINA11
AceView (NCBI)SERPINA11
Genatlas (Paris)SERPINA11
WikiGenes256394
SOURCE (Princeton)SERPINA11
Genetics Home Reference (NIH)SERPINA11
Genomic and cartography
GoldenPath hg38 (UCSC)SERPINA11  -     chr14:94442464-94452785 -  14q32.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SERPINA11  -     14q32.13   [Description]    (hg19-Feb_2009)
EnsemblSERPINA11 - 14q32.13 [CytoView hg19]  SERPINA11 - 14q32.13 [CytoView hg38]
Mapping of homologs : NCBISERPINA11 [Mapview hg19]  SERPINA11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC146962 BC152930 BX248259
RefSeq transcript (Entrez)NM_001080451
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SERPINA11
Cluster EST : UnigeneHs.145890 [ NCBI ]
CGAP (NCI)Hs.145890
Alternative Splicing GalleryENSG00000186910
Gene ExpressionSERPINA11 [ NCBI-GEO ]   SERPINA11 [ EBI - ARRAY_EXPRESS ]   SERPINA11 [ SEEK ]   SERPINA11 [ MEM ]
Gene Expression Viewer (FireBrowse)SERPINA11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)256394
GTEX Portal (Tissue expression)SERPINA11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86U17   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86U17  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86U17
Splice isoforms : SwissVarQ86U17
PhosPhoSitePlusQ86U17
Domains : Interpro (EBI)Serpin_dom    Serpin_fam   
Domain families : Pfam (Sanger)Serpin (PF00079)   
Domain families : Pfam (NCBI)pfam00079   
Domain families : Smart (EMBL)SERPIN (SM00093)  
Conserved Domain (NCBI)SERPINA11
DMDM Disease mutations256394
Blocks (Seattle)SERPINA11
SuperfamilyQ86U17
Human Protein AtlasENSG00000186910
Peptide AtlasQ86U17
IPIIPI00333828   
Protein Interaction databases
DIP (DOE-UCLA)Q86U17
IntAct (EBI)Q86U17
FunCoupENSG00000186910
BioGRIDSERPINA11
STRING (EMBL)SERPINA11
ZODIACSERPINA11
Ontologies - Pathways
QuickGOQ86U17
Ontology : AmiGOserine-type endopeptidase inhibitor activity  extracellular space  negative regulation of endopeptidase activity  
Ontology : EGO-EBIserine-type endopeptidase inhibitor activity  extracellular space  negative regulation of endopeptidase activity  
NDEx NetworkSERPINA11
Atlas of Cancer Signalling NetworkSERPINA11
Wikipedia pathwaysSERPINA11
Orthology - Evolution
OrthoDB256394
GeneTree (enSembl)ENSG00000186910
Phylogenetic Trees/Animal Genes : TreeFamSERPINA11
HOVERGENQ86U17
HOGENOMQ86U17
Homologs : HomoloGeneSERPINA11
Homology/Alignments : Family Browser (UCSC)SERPINA11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSERPINA11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SERPINA11
dbVarSERPINA11
ClinVarSERPINA11
1000_GenomesSERPINA11 
Exome Variant ServerSERPINA11
ExAC (Exome Aggregation Consortium)SERPINA11 (select the gene name)
Genetic variants : HAPMAP256394
Genomic Variants (DGV)SERPINA11 [DGVbeta]
DECIPHERSERPINA11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSERPINA11 
Mutations
ICGC Data PortalSERPINA11 
TCGA Data PortalSERPINA11 
Broad Tumor PortalSERPINA11
OASIS PortalSERPINA11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSERPINA11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSERPINA11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SERPINA11
DgiDB (Drug Gene Interaction Database)SERPINA11
DoCM (Curated mutations)SERPINA11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SERPINA11 (select a term)
intoGenSERPINA11
Cancer3DSERPINA11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSERPINA11
Genetic Testing Registry SERPINA11
NextProtQ86U17 [Medical]
TSGene256394
GENETestsSERPINA11
Target ValidationSERPINA11
Huge Navigator SERPINA11 [HugePedia]
snp3D : Map Gene to Disease256394
BioCentury BCIQSERPINA11
ClinGenSERPINA11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD256394
Chemical/Pharm GKB GenePA134988362
Clinical trialSERPINA11
Miscellaneous
canSAR (ICR)SERPINA11 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSERPINA11
EVEXSERPINA11
GoPubMedSERPINA11
iHOPSERPINA11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:37:36 CEST 2017

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