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SERPINA2 (serpin family A member 2 (gene/pseudogene))

Identity

Alias_namesPIL
SERPINA2P
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2, pseudogene
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene)
Alias_symbol (synonym)ATR
ARGS
Other aliaspsiATR
HGNC (Hugo) SERPINA2
LocusID (NCBI) 390502
Atlas_Id 73141
Location 14q32.13  [Link to chromosome band 14q32]
Location_base_pair Starts at 94363638 and ends at 94366702 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SERPINA2   8985
Cards
Entrez_Gene (NCBI)SERPINA2  390502  serpin family A member 2 (gene/pseudogene)
AliasesARGS; ATR; PIL; SERPINA2P; 
psiATR
GeneCards (Weizmann)SERPINA2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:94363638-94366702 [Contig_View]  SERPINA2 [Vega]
TCGA cBioPortalSERPINA2
AceView (NCBI)SERPINA2
Genatlas (Paris)SERPINA2
WikiGenes390502
SOURCE (Princeton)SERPINA2
Genetics Home Reference (NIH)SERPINA2
Genomic and cartography
GoldenPath hg38 (UCSC)SERPINA2  -     chr14:94363638-94366702 -  14q32.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SERPINA2  -     14q32.13   [Description]    (hg19-Feb_2009)
EnsemblSERPINA2 - 14q32.13 [CytoView hg19]  SERPINA2 - 14q32.13 [CytoView hg38]
Mapping of homologs : NCBISERPINA2 [Mapview hg19]  SERPINA2 [Mapview hg38]
OMIM107410   
Gene and transcription
Genbank (Entrez)DB526949 JX680599
RefSeq transcript (Entrez)NM_006220
RefSeq genomic (Entrez)NC_000014 NC_018925 NG_032041 NT_187601
Consensus coding sequences : CCDS (NCBI)SERPINA2
Cluster EST : UnigeneHs.525557 [ NCBI ]
CGAP (NCI)Hs.525557
Gene ExpressionSERPINA2 [ NCBI-GEO ]   SERPINA2 [ EBI - ARRAY_EXPRESS ]   SERPINA2 [ SEEK ]   SERPINA2 [ MEM ]
Gene Expression Viewer (FireBrowse)SERPINA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390502
GTEX Portal (Tissue expression)SERPINA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP20848   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP20848  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP20848
Splice isoforms : SwissVarP20848
PhosPhoSitePlusP20848
Domaine pattern : Prosite (Expaxy)SERPIN (PS00284)   
Domains : Interpro (EBI)Serpin_CS    Serpin_dom    Serpin_fam   
Domain families : Pfam (Sanger)Serpin (PF00079)   
Domain families : Pfam (NCBI)pfam00079   
Domain families : Smart (EMBL)SERPIN (SM00093)  
Conserved Domain (NCBI)SERPINA2
DMDM Disease mutations390502
Blocks (Seattle)SERPINA2
SuperfamilyP20848
Peptide AtlasP20848
IPIIPI00736763   
Protein Interaction databases
DIP (DOE-UCLA)P20848
IntAct (EBI)P20848
BioGRIDSERPINA2
STRING (EMBL)SERPINA2
ZODIACSERPINA2
Ontologies - Pathways
QuickGOP20848
Ontology : AmiGOserine-type endopeptidase inhibitor activity  protein binding  extracellular space  endoplasmic reticulum  negative regulation of endopeptidase activity  
Ontology : EGO-EBIserine-type endopeptidase inhibitor activity  protein binding  extracellular space  endoplasmic reticulum  negative regulation of endopeptidase activity  
NDEx NetworkSERPINA2
Atlas of Cancer Signalling NetworkSERPINA2
Wikipedia pathwaysSERPINA2
Orthology - Evolution
OrthoDB390502
Phylogenetic Trees/Animal Genes : TreeFamSERPINA2
HOVERGENP20848
HOGENOMP20848
Homologs : HomoloGeneSERPINA2
Homology/Alignments : Family Browser (UCSC)SERPINA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSERPINA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SERPINA2
dbVarSERPINA2
ClinVarSERPINA2
1000_GenomesSERPINA2 
Exome Variant ServerSERPINA2
ExAC (Exome Aggregation Consortium)SERPINA2 (select the gene name)
Genetic variants : HAPMAP390502
Genomic Variants (DGV)SERPINA2 [DGVbeta]
DECIPHERSERPINA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSERPINA2 
Mutations
ICGC Data PortalSERPINA2 
TCGA Data PortalSERPINA2 
Broad Tumor PortalSERPINA2
OASIS PortalSERPINA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSERPINA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSERPINA2
BioMutasearch SERPINA2
DgiDB (Drug Gene Interaction Database)SERPINA2
DoCM (Curated mutations)SERPINA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SERPINA2 (select a term)
intoGenSERPINA2
Cancer3DSERPINA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM107410   
Orphanet
MedgenSERPINA2
Genetic Testing Registry SERPINA2
NextProtP20848 [Medical]
TSGene390502
GENETestsSERPINA2
Target ValidationSERPINA2
Huge Navigator SERPINA2 [HugePedia]
snp3D : Map Gene to Disease390502
BioCentury BCIQSERPINA2
ClinGenSERPINA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390502
Chemical/Pharm GKB GenePA35520
Clinical trialSERPINA2
Miscellaneous
canSAR (ICR)SERPINA2 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSERPINA2
EVEXSERPINA2
GoPubMedSERPINA2
iHOPSERPINA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:40:27 CEST 2017

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