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SERPINA9 (serpin family A member 9)

Identity

Alias_namesserine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
Alias_symbol (synonym)CENTERIN
SERPINA11b
GCET1
Other aliasSERPINA11
HGNC (Hugo) SERPINA9
LocusID (NCBI) 327657
Atlas_Id 46291
Location 14q32.13  [Link to chromosome band 14q32]
Location_base_pair Starts at 94462721 and ends at 94476333 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
RPL32 (3p25.2) / SERPINA9 (14q32.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SERPINA9   15995
Cards
Entrez_Gene (NCBI)SERPINA9  327657  serpin family A member 9
AliasesGCET1; SERPINA11; SERPINA11b
GeneCards (Weizmann)SERPINA9
Ensembl hg19 (Hinxton)ENSG00000170054 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170054 [Gene_View]  ENSG00000170054 [Sequence]  chr14:94462721-94476333 [Contig_View]  SERPINA9 [Vega]
ICGC DataPortalENSG00000170054
TCGA cBioPortalSERPINA9
AceView (NCBI)SERPINA9
Genatlas (Paris)SERPINA9
WikiGenes327657
SOURCE (Princeton)SERPINA9
Genetics Home Reference (NIH)SERPINA9
Genomic and cartography
GoldenPath hg38 (UCSC)SERPINA9  -     chr14:94462721-94476333 -  14q32.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SERPINA9  -     14q32.13   [Description]    (hg19-Feb_2009)
SERPINA9 - 14q32.13 [CytoView hg19]  SERPINA9 - 14q32.13 [CytoView hg38]
Mapping of homologs : NCBISERPINA9 [Mapview hg19]  SERPINA9 [Mapview hg38]
OMIM615677   
Gene and transcription
Genbank (Entrez)AK301082 AY185496 AY185497 AY220118 AY220119
RefSeq transcript (Entrez)NM_001042518 NM_001284275 NM_001284276 NM_175739
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SERPINA9
Cluster EST : UnigeneHs.317970 [ NCBI ]
CGAP (NCI)Hs.317970
Alternative Splicing GalleryENSG00000170054
Gene ExpressionSERPINA9 [ NCBI-GEO ]   SERPINA9 [ EBI - ARRAY_EXPRESS ]   SERPINA9 [ SEEK ]   SERPINA9 [ MEM ]
Gene Expression Viewer (FireBrowse)SERPINA9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)327657
GTEX Portal (Tissue expression)SERPINA9
Human Protein AtlasENSG00000170054-SERPINA9 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86WD7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86WD7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86WD7
Splice isoforms : SwissVarQ86WD7
PhosPhoSitePlusQ86WD7
Domaine pattern : Prosite (Expaxy)SERPIN (PS00284)   
Domains : Interpro (EBI)Serpin_CS    Serpin_dom    Serpin_fam    Serpin_sf   
Domain families : Pfam (Sanger)Serpin (PF00079)   
Domain families : Pfam (NCBI)pfam00079   
Domain families : Smart (EMBL)SERPIN (SM00093)  
Conserved Domain (NCBI)SERPINA9
DMDM Disease mutations327657
Blocks (Seattle)SERPINA9
SuperfamilyQ86WD7
Human Protein Atlas [tissue]ENSG00000170054-SERPINA9 [tissue]
Peptide AtlasQ86WD7
HPRD11546
IPIIPI00941036   IPI00942892   IPI00651635   IPI01014997   IPI00395944   IPI00651735   IPI00944611   
Protein Interaction databases
DIP (DOE-UCLA)Q86WD7
IntAct (EBI)Q86WD7
FunCoupENSG00000170054
BioGRIDSERPINA9
STRING (EMBL)SERPINA9
ZODIACSERPINA9
Ontologies - Pathways
QuickGOQ86WD7
Ontology : AmiGOserine-type endopeptidase inhibitor activity  serine-type endopeptidase inhibitor activity  extracellular space  cytoplasm  negative regulation of endopeptidase activity  membrane  
Ontology : EGO-EBIserine-type endopeptidase inhibitor activity  serine-type endopeptidase inhibitor activity  extracellular space  cytoplasm  negative regulation of endopeptidase activity  membrane  
NDEx NetworkSERPINA9
Atlas of Cancer Signalling NetworkSERPINA9
Wikipedia pathwaysSERPINA9
Orthology - Evolution
OrthoDB327657
GeneTree (enSembl)ENSG00000170054
Phylogenetic Trees/Animal Genes : TreeFamSERPINA9
HOGENOMQ86WD7
Homologs : HomoloGeneSERPINA9
Homology/Alignments : Family Browser (UCSC)SERPINA9
Gene fusions - Rearrangements
Fusion : QuiverSERPINA9
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSERPINA9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SERPINA9
dbVarSERPINA9
ClinVarSERPINA9
1000_GenomesSERPINA9 
Exome Variant ServerSERPINA9
ExAC (Exome Aggregation Consortium)ENSG00000170054
GNOMAD BrowserENSG00000170054
Varsome BrowserSERPINA9
Genetic variants : HAPMAP327657
Genomic Variants (DGV)SERPINA9 [DGVbeta]
DECIPHERSERPINA9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSERPINA9 
Mutations
ICGC Data PortalSERPINA9 
TCGA Data PortalSERPINA9 
Broad Tumor PortalSERPINA9
OASIS PortalSERPINA9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSERPINA9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSERPINA9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SERPINA9
DgiDB (Drug Gene Interaction Database)SERPINA9
DoCM (Curated mutations)SERPINA9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SERPINA9 (select a term)
intoGenSERPINA9
Cancer3DSERPINA9(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615677   
Orphanet
DisGeNETSERPINA9
MedgenSERPINA9
Genetic Testing Registry SERPINA9
NextProtQ86WD7 [Medical]
TSGene327657
GENETestsSERPINA9
Target ValidationSERPINA9
Huge Navigator SERPINA9 [HugePedia]
snp3D : Map Gene to Disease327657
BioCentury BCIQSERPINA9
ClinGenSERPINA9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD327657
Chemical/Pharm GKB GenePA38077
Clinical trialSERPINA9
Miscellaneous
canSAR (ICR)SERPINA9 (select the gene name)
DataMed IndexSERPINA9
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSERPINA9
EVEXSERPINA9
GoPubMedSERPINA9
iHOPSERPINA9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu May 2 13:09:46 CEST 2019

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