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SERPINB11 (serpin family B member 11 (gene/pseudogene))

Identity

Alias_namesserine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 11
serpin peptidase inhibitor, clade B (ovalbumin), member 11
serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
Alias_symbol (synonym)EPIPIN
Other aliasSERPIN11
HGNC (Hugo) SERPINB11
LocusID (NCBI) 89778
Atlas_Id 52679
Location 18q21.33  [Link to chromosome band 18q21]
Location_base_pair Starts at 61370193 and ends at 61391127 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SERPINB11   14221
Cards
Entrez_Gene (NCBI)SERPINB11  89778  serpin family B member 11 (gene/pseudogene)
AliasesEPIPIN; SERPIN11
GeneCards (Weizmann)SERPINB11
Ensembl hg19 (Hinxton)ENSG00000206072 [Gene_View]  chr18:61370193-61391127 [Contig_View]  SERPINB11 [Vega]
Ensembl hg38 (Hinxton)ENSG00000206072 [Gene_View]  chr18:61370193-61391127 [Contig_View]  SERPINB11 [Vega]
ICGC DataPortalENSG00000206072
TCGA cBioPortalSERPINB11
AceView (NCBI)SERPINB11
Genatlas (Paris)SERPINB11
WikiGenes89778
SOURCE (Princeton)SERPINB11
Genetics Home Reference (NIH)SERPINB11
Genomic and cartography
GoldenPath hg19 (UCSC)SERPINB11  -     chr18:61370193-61391127 +  18q21.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SERPINB11  -     18q21.33   [Description]    (hg38-Dec_2013)
EnsemblSERPINB11 - 18q21.33 [CytoView hg19]  SERPINB11 - 18q21.33 [CytoView hg38]
Mapping of homologs : NCBISERPINB11 [Mapview hg19]  SERPINB11 [Mapview hg38]
OMIM615682   
Gene and transcription
Genbank (Entrez)AF419953 AF419954 AF419955 AK292775 AK296705
RefSeq transcript (Entrez)NM_001291278 NM_001291279 NM_080475
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010966 NW_004929411
Consensus coding sequences : CCDS (NCBI)SERPINB11
Cluster EST : UnigeneHs.350958 [ NCBI ]
CGAP (NCI)Hs.350958
Alternative Splicing GalleryENSG00000206072
Gene ExpressionSERPINB11 [ NCBI-GEO ]   SERPINB11 [ EBI - ARRAY_EXPRESS ]   SERPINB11 [ SEEK ]   SERPINB11 [ MEM ]
Gene Expression Viewer (FireBrowse)SERPINB11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)89778
GTEX Portal (Tissue expression)SERPINB11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96P15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96P15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96P15
Splice isoforms : SwissVarQ96P15
PhosPhoSitePlusQ96P15
Domaine pattern : Prosite (Expaxy)SERPIN (PS00284)   
Domains : Interpro (EBI)Serpin_CS    Serpin_dom    Serpin_fam   
Domain families : Pfam (Sanger)Serpin (PF00079)   
Domain families : Pfam (NCBI)pfam00079   
Domain families : Smart (EMBL)SERPIN (SM00093)  
Conserved Domain (NCBI)SERPINB11
DMDM Disease mutations89778
Blocks (Seattle)SERPINB11
SuperfamilyQ96P15
Human Protein AtlasENSG00000206072
Peptide AtlasQ96P15
HPRD11547
IPIIPI00289606   IPI00979204   IPI00982372   IPI01015035   IPI01018796   
Protein Interaction databases
DIP (DOE-UCLA)Q96P15
IntAct (EBI)Q96P15
FunCoupENSG00000206072
BioGRIDSERPINB11
STRING (EMBL)SERPINB11
ZODIACSERPINB11
Ontologies - Pathways
QuickGOQ96P15
Ontology : AmiGOserine-type endopeptidase inhibitor activity  extracellular space  cytoplasm  negative regulation of endopeptidase activity  negative regulation of endopeptidase activity  
Ontology : EGO-EBIserine-type endopeptidase inhibitor activity  extracellular space  cytoplasm  negative regulation of endopeptidase activity  negative regulation of endopeptidase activity  
NDEx NetworkSERPINB11
Atlas of Cancer Signalling NetworkSERPINB11
Wikipedia pathwaysSERPINB11
Orthology - Evolution
OrthoDB89778
GeneTree (enSembl)ENSG00000206072
Phylogenetic Trees/Animal Genes : TreeFamSERPINB11
HOVERGENQ96P15
HOGENOMQ96P15
Homologs : HomoloGeneSERPINB11
Homology/Alignments : Family Browser (UCSC)SERPINB11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSERPINB11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SERPINB11
dbVarSERPINB11
ClinVarSERPINB11
1000_GenomesSERPINB11 
Exome Variant ServerSERPINB11
ExAC (Exome Aggregation Consortium)SERPINB11 (select the gene name)
Genetic variants : HAPMAP89778
Genomic Variants (DGV)SERPINB11 [DGVbeta]
DECIPHER (Syndromes)18:61370193-61391127  ENSG00000206072
CONAN: Copy Number AnalysisSERPINB11 
Mutations
ICGC Data PortalSERPINB11 
TCGA Data PortalSERPINB11 
Broad Tumor PortalSERPINB11
OASIS PortalSERPINB11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSERPINB11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSERPINB11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SERPINB11
DgiDB (Drug Gene Interaction Database)SERPINB11
DoCM (Curated mutations)SERPINB11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SERPINB11 (select a term)
intoGenSERPINB11
Cancer3DSERPINB11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615682   
Orphanet
MedgenSERPINB11
Genetic Testing Registry SERPINB11
NextProtQ96P15 [Medical]
TSGene89778
GENETestsSERPINB11
Huge Navigator SERPINB11 [HugePedia]
snp3D : Map Gene to Disease89778
BioCentury BCIQSERPINB11
ClinGenSERPINB11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD89778
Chemical/Pharm GKB GenePA37860
Clinical trialSERPINB11
Miscellaneous
canSAR (ICR)SERPINB11 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSERPINB11
EVEXSERPINB11
GoPubMedSERPINB11
iHOPSERPINB11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:18:52 CEST 2017

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