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SERPINF2 (serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2)

Identity

Other namesA2AP
AAP
ALPHA-2-PI
API
PLI
HGNC (Hugo) SERPINF2
Location 17p13.3
Location_base_pair Starts at 1592880 and ends at 1605309 bp from pter ( according to hg18-March_2006)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)SERPINF2   9075
Entrez_Gene (NCBI)SERPINF2  5345  serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2
Cards
GeneCards (Weizmann)SERPINF2
Ensembl (Hinxton)ENSG00000167711 [Gene_View]  SERPINF2 [Vega]
AceView (NCBI)SERPINF2
Genatlas (Paris)SERPINF2
euGene (Indiana)5345
SOURCE (Stanford)NM_000934 NM_001165920 NM_001165921
Gene Expression (Array Express) ENSG00000167711
Genomic and cartography
GoldenPath (UCSC)SERPINF2  -  17p13.3   chr17:1592880-1605309 +  17p13.3   [Description]    (hg18-March_2006)
EnsemblSERPINF2 - 17p13.3 [CytoView]
Mapping of homologs : NCBISERPINF2 [Mapview]
OMIM262850   613168   
Gene and transcription
Gene : Genbank (Entrez)AK303763 AL564784 BC031592 BX107460 CK300825
Reference sequence (RefSeq transcript) :SRSNM_000934 NM_001165920 NM_001165921
Reference transcript : EntrezNM_000934 NM_001165920 NM_001165921
RefSeq genomic : SRSAC_000060 AC_000149 NC_000017 NG_013215 NT_010718 NW_001838403 NW_926584
RefSeq genomic : EntrezAC_000060 AC_000149 NC_000017 NG_013215 NT_010718 NW_001838403 NW_926584
Consensus coding sequences : CCDS NCBISERPINF2
Cluster EST : UnigeneHs.159509 [ SRS ] Hs.159509 [ NCBI ]
Alternative Splicing : Fast-db (Paris)628
Protein : pattern, domain, 3D structure
Protein : UniProt/SwissProtP08697 (SRS) P08697 (Expasy) P08697 (Uniprot)
With graphics : InterProP08697
Splice isoforms : VarSplice FASTAP08697(VarSplice FASTA)
Domaine pattern : Prosite (SRS)SERPIN (PS00284)   
Domain pattern : Prosite (Expaxy)SERPIN (PS00284)   
Domains : Interpro (SRS)Protease_inhib_I4_serpin   
Domains : Interpro (EBI)Protease_inhib_I4_serpin   
Related proteins : CluSTrP08697
Domain families : Pfam SRSSerpin (PF00079)   
Domain families : Pfam SangerSerpin (PF00079)   
Domain families : Pfam NCBIpfam00079   
Domain families : Smart EMBLSERPIN (SM00093)  
Blocks (Seattle)P08697
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
HPRD02029
Protein Interaction databases
DIP (DOE-UCLA)P08697
IntAct (EBI)P08697
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBISERPINF2
SNP : GeneSNP UtahSERPINF2
SNP : HGBaseSERPINF2
Genetic variants : HAPMAPSERPINF2
Somatic Mutations in Cancer : COSMICSERPINF2 
Mutations and Diseases : HGMDSERPINF2
Hereditary diseases : OMIM262850    613168   
Hereditary diseases : GENETests262850    613168   
Diseases : Genetic AssociationSERPINF2
General knowledge
Homologs : HomoloGeneSERPINF2
Homology/Alignments : Family Browser UCSCSERPINF2
Phylogenetic Trees/Animal Genes : TreeFamSERPINF2
Chemical/Protein Interactions : CTD5345
Keywords Ontology : AmiGOprotease binding  serine-type endopeptidase inhibitor activity  protein binding  extracellular region  extracellular region  extracellular space  acute-phase response  response to organic substance  platelet alpha granule lumen  negative regulation of fibrinolysis  
Keywords Ontology : EGO-EBIprotease binding  serine-type endopeptidase inhibitor activity  protein binding  extracellular region  extracellular region  extracellular space  acute-phase response  response to organic substance  platelet alpha granule lumen  negative regulation of fibrinolysis  
Pathways : BIOCARTA
Pathways : KEGGComplement and coagulation cascades
Other databases
Probes
Probes : ImagenesSERPINF2 Related clones (RZPD - Berlin)
Literature
PubMed59 Pubmed reference(s) in Entrez
PubGeneSERPINF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:36:26 CET 2010
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