Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SETP5 (SET pseudogene 5)

Identity

Other alias-
HGNC (Hugo) SETP5
LocusID (NCBI) 100130014
Atlas_Id 52004
Location 9q34.3  [Link to chromosome band 9q34]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SETP5   42924
Cards
Entrez_Gene (NCBI)SETP5  100130014  SET pseudogene 5
Aliases
GeneCards (Weizmann)SETP5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  SETP5 [Vega]
TCGA cBioPortalSETP5
AceView (NCBI)SETP5
Genatlas (Paris)SETP5
WikiGenes100130014
SOURCE (Princeton)SETP5
Genetics Home Reference (NIH)SETP5
Genomic and cartography
GoldenPath hg38 (UCSC)SETP5  -  
GoldenPath hg19 (UCSC)SETP5  -  
EnsemblSETP5 - [CytoView hg19]  SETP5 - [CytoView hg38]
Mapping of homologs : NCBISETP5 [Mapview hg19]  SETP5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SETP5
Gene ExpressionSETP5 [ NCBI-GEO ]   SETP5 [ EBI - ARRAY_EXPRESS ]   SETP5 [ SEEK ]   SETP5 [ MEM ]
Gene Expression Viewer (FireBrowse)SETP5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130014
GTEX Portal (Tissue expression)SETP5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SETP5
DMDM Disease mutations100130014
Blocks (Seattle)SETP5
Protein Interaction databases
BioGRIDSETP5
STRING (EMBL)SETP5
ZODIACSETP5
Ontologies - Pathways
Huge Navigator SETP5 [HugePedia]
snp3D : Map Gene to Disease100130014
BioCentury BCIQSETP5
ClinGenSETP5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130014
Clinical trialSETP5
Miscellaneous
canSAR (ICR)SETP5 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineSETP5
EVEXSETP5
GoPubMedSETP5
iHOPSETP5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:34:16 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.