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SEZ6L (seizure related 6 homolog (mouse)-like)

Identity

Other names-
HGNC (Hugo) SEZ6L
LocusID (NCBI) 23544
Location 22q12.1
Location_base_pair Starts at 26565440 and ends at 26779563 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)SEZ6L   10763
Entrez_Gene (NCBI)SEZ6L  23544  seizure related 6 homolog (mouse)-like
Cards
GeneCards (Weizmann)SEZ6L
Ensembl (Hinxton)ENSG00000100095 [Gene_View]  chr22:26565440-26779563 [Contig_View]  SEZ6L [Vega]
AceView (NCBI)SEZ6L
Genatlas (Paris)SEZ6L
SOURCE (Stanford)NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115
Genomic and cartography
GoldenPath (UCSC)SEZ6L  -  22q12.1   chr22:26565440-26779563 +  22q12.1   [Description]    (hg19-Feb_2009)
EnsemblSEZ6L - 22q12.1 [CytoView]
Mapping of homologs : NCBISEZ6L [Mapview]
OMIM607021   
Gene and transcription
Genbank (Entrez)AB023144 AB041736 AK294790 AL035545 AL050253
RefSeq transcript (SRS)NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115
RefSeq transcript (Entrez)NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115
RefSeq genomic (SRS)AC_000154 NC_000022 NC_018933 NT_011520 NW_001838745 NW_004078112
RefSeq genomic (Entrez)AC_000154 NC_000022 NC_018933 NT_011520 NW_001838745 NW_004078112
Consensus coding sequences : CCDS (NCBI)SEZ6L
Cluster EST : UnigeneHs.194766 [ SRS ] Hs.194766 [ NCBI ]
CGAP (NCI)Hs.194766
Alternative Splicing : Fast-db (Paris)GSHG0019912
Alternative Splicing GalleryENSG00000100095
Gene ExpressionSEZ6L [ NCBI-GEO ]   SEZ6L [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BYH1 (SRS) Q9BYH1 (Uniprot)
NextProtQ9BYH1
With graphics : InterProQ9BYH1
Splice isoforms : SwissVarQ9BYH1(Swissvar)
Domaine pattern : Prosite (SRS)CUB (PS01180)    SUSHI (PS50923)   
Domaine pattern : Prosite (Expaxy)CUB (PS01180)    SUSHI (PS50923)   
Domains : Interpro (SRS)Complement_control_module    CUB    Sushi_SCR_CCP   
Domains : Interpro (EBI)Complement_control_module    CUB    Sushi_SCR_CCP   
Related proteins : CluSTrQ9BYH1
Domain families : Pfam (SRS)CUB (PF00431)    Sushi (PF00084)   
Domain families : Pfam (Sanger)CUB (PF00431)    Sushi (PF00084)   
Domain families : Pfam (NCBI)pfam00431    pfam00084   
Domain families : Smart (EMBL)CCP (SM00032)  CUB (SM00042)  
DMDM23544
Blocks (Seattle)Q9BYH1
PDB (SRS)2YRA   
PDB (PDBSum)2YRA   
PDB (IMB)2YRA   
PDB (RSDB)2YRA   
Human Protein AtlasENSG00000100095
HPRD08449
IPIIPI00157417   IPI00220334   IPI00554736   IPI00879665   IPI00908808   IPI00982027   IPI00981361   IPI00163788   IPI00220333   
Protein Interaction databases
DIP (DOE-UCLA)Q9BYH1
IntAct (EBI)Q9BYH1
FunCoupENSG00000100095
REACTOMESEZ6L
Protein Interaction Database23544
BioGRIDSEZ6L
InParanoidQ9BYH1
Interologous Interaction database Q9BYH1
IntegromeDBSEZ6L
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)SEZ6L
SNP (GeneSNP Utah)SEZ6L
SNP : HGBaseSEZ6L
Genetic variants : HAPMAPSEZ6L
Somatic Mutations in Cancer : COSMICSEZ6L 
CONAN: Copy Number AnalysisSEZ6L 
Mutations and Diseases : HGMDSEZ6L
OMIM607021   
GENETests607021   
Disease Genetic AssociationSEZ6L
Huge Navigator SEZ6L [HugePedia]  SEZ6L [HugeCancerGEM]
Genomic VariantsSEZ6L  SEZ6L [DGVbeta]
snp3D : Map Gene to Disease23544
General knowledge
Homologs : HomoloGeneSEZ6L
Homology/Alignments : Family Browser (UCSC)SEZ6L
Phylogenetic Trees/Animal Genes : TreeFamSEZ6L
Chemical/Protein Interactions : CTD23544
Chemical/Pharm GKB GenePA35681
Clinical trialSEZ6L
Cancer Resource (Charite)ENSG00000100095
Ontology : AmiGOendoplasmic reticulum membrane  integral to membrane  
Ontology : EGO-EBIendoplasmic reticulum membrane  integral to membrane  
Other databases
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
PubGeneSEZ6L
iHOPSEZ6L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:47:47 CEST 2013
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