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SFTPA2 (surfactant protein A2)

Identity

Alias (NCBI)COLEC5
PSAP
PSP-A
PSPA
SFTP1
SFTPA2B
SP-2A
SP-A
SPA2
SPAII
HGNC (Hugo) SFTPA2
HGNC Alias symbSP-A2
COLEC5
HGNC Alias namesurfactant, pulmonary-associated protein A2A
HGNC Previous namesurfactant, pulmonary-associated protein A2
LocusID (NCBI) 729238
Atlas_Id 50697
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 79555852 and ends at 79559871 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AGER (6p21.32) / SFTPA2 (10q22.3)FTL (19q13.33) / SFTPA2 (10q22.3)SFTPA2 (10q22.3) / MMP14 (14q11.2)
SFTPA2 (10q22.3) / SFTPB (2p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SFTPA2   10799
Cards
Entrez_Gene (NCBI)SFTPA2    surfactant protein A2
AliasesCOLEC5; PSAP; PSP-A; PSPA; 
SFTP1; SFTPA2B; SP-2A; SP-A; SPA2; SPAII
GeneCards (Weizmann)SFTPA2
Ensembl hg19 (Hinxton)ENSG00000185303 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185303 [Gene_View]  ENSG00000185303 [Sequence]  chr10:79555852-79559871 [Contig_View]  SFTPA2 [Vega]
ICGC DataPortalENSG00000185303
TCGA cBioPortalSFTPA2
AceView (NCBI)SFTPA2
Genatlas (Paris)SFTPA2
SOURCE (Princeton)SFTPA2
Genetics Home Reference (NIH)SFTPA2
Genomic and cartography
GoldenPath hg38 (UCSC)SFTPA2  -     chr10:79555852-79559871 -  10q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SFTPA2  -     10q22.3   [Description]    (hg19-Feb_2009)
GoldenPathSFTPA2 - 10q22.3 [CytoView hg19]  SFTPA2 - 10q22.3 [CytoView hg38]
ImmunoBaseENSG00000185303
Genome Data Viewer NCBISFTPA2 [Mapview hg19]  
OMIM178500   178642   
Gene and transcription
Genbank (Entrez)AK225599 AK298041 AK298074 AK298114 AK313179
RefSeq transcript (Entrez)NM_001098668 NM_001320813 NM_001320814
Consensus coding sequences : CCDS (NCBI)SFTPA2
Gene ExpressionSFTPA2 [ NCBI-GEO ]   SFTPA2 [ EBI - ARRAY_EXPRESS ]   SFTPA2 [ SEEK ]   SFTPA2 [ MEM ]
Gene Expression Viewer (FireBrowse)SFTPA2 [ Firebrowse - Broad ]
GenevisibleExpression of SFTPA2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)729238
GTEX Portal (Tissue expression)SFTPA2
Human Protein AtlasENSG00000185303-SFTPA2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SFTPA2
Human Protein Atlas [tissue]ENSG00000185303-SFTPA2 [tissue]
Protein Interaction databases
BioGRIDSFTPA2
STRING (EMBL)SFTPA2
ZODIACSFTPA2
Ontologies - Pathways
Litterature
PubMed50 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSFTPA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:30:54 CEST 2021

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