SFXN2 (sideroflexin 2)

2014-11-01  

Identity

HGNC
SFXN2
LOCATION
10q24.32
LOCUSID
118980
ALIAS
SLC56A2
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 118980
MIM: 615570
HGNC: 16086
Ensembl: ENSG00000156398

Variants:

dbSNP: 118980
ClinVar: 118980
TCGA: ENSG00000156398
COSMIC: SFXN2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000156398ENST00000369893Q96NB2
ENSG00000156398ENST00000459894A0A0C4DGR6
ENSG00000156398ENST00000480358R4GN63
ENSG00000156398ENST00000602439R4GNC2
ENSG00000156398ENST00000602544R4GMR9
ENSG00000156398ENST00000602647R4GMX4
ENSG00000156398ENST00000602670R4GMS6
ENSG00000156398ENST00000602764R4GN74
ENSG00000156398ENST00000602831A0A1B0GX61
ENSG00000156398ENST00000602868R4GMW0

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
163854512006A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease.69
208776242010Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.17
126700262003Isolation and characterization of a novel human putative anemia-related gene homologous to mouse sideroflexin.3
305707042019Regulation of mitochondrial iron homeostasis by sideroflexin 2.3

Citation

Dessen P

SFXN2 (sideroflexin 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73174/sfxn2