SGCA (sarcoglycan alpha)

2010-04-01  

Identity

HGNC
LOCATION
17q21.33
LOCUSID
ALIAS
50DAG,ADL,DAG2,DMDA2,LGMD2D,LGMDR3,SCARMD1,adhalin
FUSION GENES

Other Information

Locus ID:

NCBI: 6442
MIM: 600119
HGNC: 10805
Ensembl: ENSG00000108823

Variants:

dbSNP: 6442
ClinVar: 6442
TCGA: ENSG00000108823
COSMIC: SGCA

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000108823ENST00000262018Q16586
ENSG00000108823ENST00000262018A0A0S2Z4Q1
ENSG00000108823ENST00000344627Q16586
ENSG00000108823ENST00000344627A0A0S2Z4P8
ENSG00000108823ENST00000502555D6RAA4
ENSG00000108823ENST00000504073H0Y8T1
ENSG00000108823ENST00000511303H7C5V0
ENSG00000108823ENST00000512526H0YAB9
ENSG00000108823ENST00000513821E9PCT8
ENSG00000108823ENST00000514934D6R9S3

Expression (GTEx)

0
50
100
150
200
250

Pathways

PathwaySourceExternal ID
Hypertrophic cardiomyopathy (HCM)KEGGko05410
Hypertrophic cardiomyopathy (HCM)KEGGhsa05410
Arrhythmogenic right ventricular cardiomyopathy (ARVC)KEGGko05412
Arrhythmogenic right ventricular cardiomyopathy (ARVC)KEGGhsa05412
Dilated cardiomyopathyKEGGko05414
Dilated cardiomyopathyKEGGhsa05414
Viral myocarditisKEGGhsa05416

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
390608752024Exome sequencing revealed variants in SGCA and SIL1 genes underlying limb girdle muscular dystrophy and Marinesco-Sjögren syndrome patients.0
390608752024Exome sequencing revealed variants in SGCA and SIL1 genes underlying limb girdle muscular dystrophy and Marinesco-Sjögren syndrome patients.0
338482702021Base editing repairs an SGCA mutation in human primary muscle stem cells.11
338482702021Base editing repairs an SGCA mutation in human primary muscle stem cells.11
302189212018Milder forms of α-sarcoglicanopathies diagnosed in adulthood by NGS analysis.4
302189212018Milder forms of α-sarcoglicanopathies diagnosed in adulthood by NGS analysis.4
280813712017GWAS Identifies New Loci for Painful Temporomandibular Disorder: Hispanic Community Health Study/Study of Latinos.16
280813712017GWAS Identifies New Loci for Painful Temporomandibular Disorder: Hispanic Community Health Study/Study of Latinos.16
269343792016Homozygous nonsense mutation in SGCA is a common cause of limb-girdle muscular dystrophy in Assiut, Egypt.7
269441682016Probable high prevalence of limb-girdle muscular dystrophy type 2D in Taiwan.5
269343792016Homozygous nonsense mutation in SGCA is a common cause of limb-girdle muscular dystrophy in Assiut, Egypt.7
269441682016Probable high prevalence of limb-girdle muscular dystrophy type 2D in Taiwan.5
245658662014Unveiling the degradative route of the V247M α-sarcoglycan mutant responsible for LGMD-2D.19
252796972014B4GAT1 is the priming enzyme for the LARGE-dependent functional glycosylation of α-dystroglycan.50
245658662014Unveiling the degradative route of the V247M α-sarcoglycan mutant responsible for LGMD-2D.19

Citation

Dessen P

SGCA (sarcoglycan alpha)

Atlas Genet Cytogenet Oncol Haematol. 2010-04-01

Online version: http://atlasgeneticsoncology.org/gene/51446/sgca