SGCZ (sarcoglycan zeta)

2014-11-01 Affiliation

Identity

HGNC

SGCZ

LOCATION

8p22

LOCUSID

137868

ALIAS

ZSG1

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 137868
MIM: 608113
HGNC: 14075
Ensembl: ENSG00000185053

Variants:

dbSNP: 137868
ClinVar: 137868
TCGA: ENSG00000185053
COSMIC: SGCZ

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000185053	ENST00000382080	Q96LD1
ENSG00000185053	ENST00000421524	Q08AT0

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
22836685	2012	Copy number variations associated with obesity-related traits in African Americans: a joint analysis between GENOA and HyperGEN.	8
19472918	2008	Candidate-gene testing for orphan limb-girdle muscular dystrophies.	4
24792710	2014	SGCZ mutations are unlikely to be associated with myoclonus dystonia.	2

Citation

Dessen P

SGCZ (sarcoglycan zeta)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/73181/sgcz