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SGF29 (SAGA complex associated factor 29)

Identity

Alias_namesCCDC101
coiled-coil domain containing 101
Alias_symbol (synonym)FLJ32446
TDRD29
Other aliasSTAF36
HGNC (Hugo) SGF29
LocusID (NCBI) 112869
Atlas_Id 77742
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 28565249 and ends at 28603111 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SGF29   25156
Cards
Entrez_Gene (NCBI)SGF29  112869  SAGA complex associated factor 29
AliasesCCDC101; STAF36
GeneCards (Weizmann)SGF29
Ensembl hg19 (Hinxton)ENSG00000176476 [Gene_View]  chr16:28565249-28603111 [Contig_View]  SGF29 [Vega]
Ensembl hg38 (Hinxton)ENSG00000176476 [Gene_View]  chr16:28565249-28603111 [Contig_View]  SGF29 [Vega]
ICGC DataPortalENSG00000176476
TCGA cBioPortalSGF29
AceView (NCBI)SGF29
Genatlas (Paris)SGF29
WikiGenes112869
SOURCE (Princeton)SGF29
Genetics Home Reference (NIH)SGF29
Genomic and cartography
GoldenPath hg19 (UCSC)SGF29  -     chr16:28565249-28603111 +  16p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SGF29  -     16p11.2   [Description]    (hg38-Dec_2013)
EnsemblSGF29 - 16p11.2 [CytoView hg19]  SGF29 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBISGF29 [Mapview hg19]  SGF29 [Mapview hg38]
OMIM613374   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_138414
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187260 NW_004929400
Consensus coding sequences : CCDS (NCBI)SGF29
Cluster EST : UnigeneHs.655476 [ NCBI ]
CGAP (NCI)Hs.655476
Alternative Splicing GalleryENSG00000176476
Gene ExpressionSGF29 [ NCBI-GEO ]   SGF29 [ EBI - ARRAY_EXPRESS ]   SGF29 [ SEEK ]   SGF29 [ MEM ]
Gene Expression Viewer (FireBrowse)SGF29 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)112869
GTEX Portal (Tissue expression)SGF29
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SGF29
DMDM Disease mutations112869
Blocks (Seattle)SGF29
Human Protein AtlasENSG00000176476
HPRD13996
IPIIPI00061680   
Protein Interaction databases
FunCoupENSG00000176476
BioGRIDSGF29
STRING (EMBL)SGF29
ZODIACSGF29
Ontologies - Pathways
Huge Navigator SGF29 [HugePedia]
snp3D : Map Gene to Disease112869
BioCentury BCIQSGF29
ClinGenSGF29
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112869
Chemical/Pharm GKB GenePA144596468
Clinical trialSGF29
Miscellaneous
canSAR (ICR)SGF29 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSGF29
EVEXSGF29
GoPubMedSGF29
iHOPSGF29
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:43:00 CET 2017

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