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SGK494 (uncharacterized serine/threonine-protein kinase SgK494)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 124923
Atlas_Id 73184
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 26934982 and ends at 26941211 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)SGK494  124923  uncharacterized serine/threonine-protein kinase SgK494
Aliases
GeneCards (Weizmann)SGK494
Ensembl hg19 (Hinxton) [Gene_View]  chr17:26934982-26941211 [Contig_View]  SGK494 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:26934982-26941211 [Contig_View]  SGK494 [Vega]
TCGA cBioPortalSGK494
AceView (NCBI)SGK494
Genatlas (Paris)SGK494
WikiGenes124923
SOURCE (Princeton)SGK494
Genetics Home Reference (NIH)SGK494
Genomic and cartography
GoldenPath hg19 (UCSC)SGK494  -     chr17:26934982-26941211 -  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SGK494  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblSGK494 - 17q11.2 [CytoView hg19]  SGK494 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBISGK494 [Mapview hg19]  SGK494 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056265 AK057735 AK294189 BC001565 BC045622
RefSeq transcript (Entrez)NM_001174103 NM_144610
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)SGK494
Cluster EST : UnigeneHs.729077 [ NCBI ]
CGAP (NCI)Hs.729077
Gene ExpressionSGK494 [ NCBI-GEO ]   SGK494 [ EBI - ARRAY_EXPRESS ]   SGK494 [ SEEK ]   SGK494 [ MEM ]
Gene Expression Viewer (FireBrowse)SGK494 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)124923
GTEX Portal (Tissue expression)SGK494
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LW2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LW2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LW2
Splice isoforms : SwissVarQ96LW2
Catalytic activity : Enzyme2.7.11.1 [ Enzyme-Expasy ]   2.7.11.12.7.11.1 [ IntEnz-EBI ]   2.7.11.1 [ BRENDA ]   2.7.11.1 [ KEGG ]   
PhosPhoSitePlusQ96LW2
Domaine pattern : Prosite (Expaxy)PROTEIN_KINASE_DOM (PS50011)    PROTEIN_KINASE_ST (PS00108)   
Domains : Interpro (EBI)Kinase-like_dom    Prot_kinase_dom    Ser/Thr_kinase_AS   
Domain families : Pfam (Sanger)Pkinase (PF00069)   
Domain families : Pfam (NCBI)pfam00069   
Conserved Domain (NCBI)SGK494
DMDM Disease mutations124923
Blocks (Seattle)SGK494
SuperfamilyQ96LW2
Peptide AtlasQ96LW2
HPRD08680
IPIIPI00641744   IPI01014248   IPI00956412   
Protein Interaction databases
DIP (DOE-UCLA)Q96LW2
IntAct (EBI)Q96LW2
BioGRIDSGK494
STRING (EMBL)SGK494
ZODIACSGK494
Ontologies - Pathways
QuickGOQ96LW2
Ontology : AmiGOprotein serine/threonine kinase activity  ATP binding  protein phosphorylation  
Ontology : EGO-EBIprotein serine/threonine kinase activity  ATP binding  protein phosphorylation  
NDEx NetworkSGK494
Atlas of Cancer Signalling NetworkSGK494
Wikipedia pathwaysSGK494
Orthology - Evolution
OrthoDB124923
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ96LW2
HOGENOMQ96LW2
Homologs : HomoloGeneSGK494
Homology/Alignments : Family Browser (UCSC)SGK494
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSGK494 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SGK494
dbVarSGK494
ClinVarSGK494
1000_GenomesSGK494 
Exome Variant ServerSGK494
ExAC (Exome Aggregation Consortium)SGK494 (select the gene name)
Genetic variants : HAPMAP124923
Genomic Variants (DGV)SGK494 [DGVbeta]
DECIPHER (Syndromes)17:26934982-26941211  
CONAN: Copy Number AnalysisSGK494 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch SGK494
DgiDB (Drug Gene Interaction Database)SGK494
DoCM (Curated mutations)SGK494 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SGK494 (select a term)
intoGenSGK494
Cancer3DSGK494(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenSGK494
Genetic Testing Registry SGK494
NextProtQ96LW2 [Medical]
TSGene124923
GENETestsSGK494
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease124923
BioCentury BCIQSGK494
ClinGenSGK494
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD124923
Clinical trialSGK494
Miscellaneous
canSAR (ICR)SGK494 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSGK494
EVEXSGK494
GoPubMedSGK494
iHOPSGK494
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:43:01 CET 2017

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