Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SH3GL1P1 (SH3-domain GRB2-like 1 pseudogene 1)

Identity

Alias_namesSH3GLP1
SH3-domain GRB2-like pseudogene 1
SH3 domain containing GRB2 like 1 pseudogene 1
Alias_symbol (synonym)CNSA-P1
Other alias
HGNC (Hugo) SH3GL1P1
LocusID (NCBI) 6458
Atlas_Id 73206
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 30367355 and ends at 30369851 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SH3GL1P1   10835
Cards
Entrez_Gene (NCBI)SH3GL1P1  6458  SH3-domain GRB2-like 1 pseudogene 1
AliasesCNSA-P1; SH3GLP1
GeneCards (Weizmann)SH3GL1P1
Ensembl hg19 (Hinxton) [Gene_View]  chr17:30367355-30369851 [Contig_View]  SH3GL1P1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:30367355-30369851 [Contig_View]  SH3GL1P1 [Vega]
TCGA cBioPortalSH3GL1P1
AceView (NCBI)SH3GL1P1
Genatlas (Paris)SH3GL1P1
WikiGenes6458
SOURCE (Princeton)SH3GL1P1
Genetics Home Reference (NIH)SH3GL1P1
Genomic and cartography
GoldenPath hg19 (UCSC)SH3GL1P1  -     chr17:30367355-30369851 +  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SH3GL1P1  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblSH3GL1P1 - 17q11.2 [CytoView hg19]  SH3GL1P1 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBISH3GL1P1 [Mapview hg19]  SH3GL1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)X99658 X99659
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_006135 NG_026242 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)SH3GL1P1
Cluster EST : UnigeneHs.672460 [ NCBI ]
CGAP (NCI)Hs.672460
Gene ExpressionSH3GL1P1 [ NCBI-GEO ]   SH3GL1P1 [ EBI - ARRAY_EXPRESS ]   SH3GL1P1 [ SEEK ]   SH3GL1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)SH3GL1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6458
GTEX Portal (Tissue expression)SH3GL1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SH3GL1P1
DMDM Disease mutations6458
Blocks (Seattle)SH3GL1P1
IPIIPI00868753   
Protein Interaction databases
BioGRIDSH3GL1P1
STRING (EMBL)SH3GL1P1
ZODIACSH3GL1P1
Ontologies - Pathways
Huge Navigator SH3GL1P1 [HugePedia]
snp3D : Map Gene to Disease6458
BioCentury BCIQSH3GL1P1
ClinGenSH3GL1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6458
Chemical/Pharm GKB GenePA35741
Clinical trialSH3GL1P1
Miscellaneous
canSAR (ICR)SH3GL1P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSH3GL1P1
EVEXSH3GL1P1
GoPubMedSH3GL1P1
iHOPSH3GL1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:43:04 CET 2017

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