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SHISAL2B (shisa like 2B)

Identity

Alias (NCBI)FAM159B
HGNC (Hugo) SHISAL2B
LocusID (NCBI) 100132916
Atlas_Id 80358
Location 5q12.3  [Link to chromosome band 5q12]
Location_base_pair Starts at 64690503 and ends at 64718190 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)SHISAL2B   34236
Cards
Entrez_Gene (NCBI)SHISAL2B    shisa like 2B
AliasesFAM159B
GeneCards (Weizmann)SHISAL2B
Ensembl hg19 (Hinxton)ENSG00000145642 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000145642 [Gene_View]  ENSG00000145642 [Sequence]  chr5:64690503-64718190 [Contig_View]  SHISAL2B [Vega]
ICGC DataPortalENSG00000145642
TCGA cBioPortalSHISAL2B
AceView (NCBI)SHISAL2B
Genatlas (Paris)SHISAL2B
SOURCE (Princeton)SHISAL2B
Genetics Home Reference (NIH)SHISAL2B
Genomic and cartography
GoldenPath hg38 (UCSC)SHISAL2B  -     chr5:64690503-64718190 +  5q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SHISAL2B  -     5q12.3   [Description]    (hg19-Feb_2009)
GoldenPathSHISAL2B - 5q12.3 [CytoView hg19]  SHISAL2B - 5q12.3 [CytoView hg38]
ImmunoBaseENSG00000145642
Genome Data Viewer NCBISHISAL2B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BQ271827 BU785751 BU952508
RefSeq transcript (Entrez)NM_001164442
Consensus coding sequences : CCDS (NCBI)SHISAL2B
Gene ExpressionSHISAL2B [ NCBI-GEO ]   SHISAL2B [ EBI - ARRAY_EXPRESS ]   SHISAL2B [ SEEK ]   SHISAL2B [ MEM ]
Gene Expression Viewer (FireBrowse)SHISAL2B [ Firebrowse - Broad ]
GenevisibleExpression of SHISAL2B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100132916
GTEX Portal (Tissue expression)SHISAL2B
Human Protein AtlasENSG00000145642-SHISAL2B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SHISAL2B
Human Protein Atlas [tissue]ENSG00000145642-SHISAL2B [tissue]
Protein Interaction databases
BioGRIDSHISAL2B
STRING (EMBL)SHISAL2B
ZODIACSHISAL2B
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSHISAL2B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:20:32 CEST 2021

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