Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SIGLEC17P (sialic acid binding Ig like lectin 17, pseudogene)

Identity

Alias_namesSIGLECP3
sialic acid binding Ig-like lectin, pseudogene 3
sialic acid binding Ig-like lectin 17, pseudogene
Other aliasHSPC078
SIGLECP2
HGNC (Hugo) SIGLEC17P
LocusID (NCBI) 284367
Atlas_Id 73246
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 51167328 and ends at 51173524 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SIGLEC17P   15604
Cards
Entrez_Gene (NCBI)SIGLEC17P  284367  sialic acid binding Ig like lectin 17, pseudogene
AliasesHSPC078; SIGLECP2; SIGLECP3
GeneCards (Weizmann)SIGLEC17P
Ensembl hg19 (Hinxton)ENSG00000171101 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171101 [Gene_View]  chr19:51167328-51173524 [Contig_View]  SIGLEC17P [Vega]
ICGC DataPortalENSG00000171101
TCGA cBioPortalSIGLEC17P
AceView (NCBI)SIGLEC17P
Genatlas (Paris)SIGLEC17P
WikiGenes284367
SOURCE (Princeton)SIGLEC17P
Genetics Home Reference (NIH)SIGLEC17P
Genomic and cartography
GoldenPath hg38 (UCSC)SIGLEC17P  -     chr19:51167328-51173524 +  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SIGLEC17P  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblSIGLEC17P - 19q13.41 [CytoView hg19]  SIGLEC17P - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBISIGLEC17P [Mapview hg19]  SIGLEC17P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF150143 AF161341 AK301336 BC035688 BC041072
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SIGLEC17P
Cluster EST : UnigeneHs.132045 [ NCBI ]
CGAP (NCI)Hs.132045
Alternative Splicing GalleryENSG00000171101
Gene ExpressionSIGLEC17P [ NCBI-GEO ]   SIGLEC17P [ EBI - ARRAY_EXPRESS ]   SIGLEC17P [ SEEK ]   SIGLEC17P [ MEM ]
Gene Expression Viewer (FireBrowse)SIGLEC17P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284367
GTEX Portal (Tissue expression)SIGLEC17P
Human Protein AtlasENSG00000171101-SIGLEC17P [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SIGLEC17P
DMDM Disease mutations284367
Blocks (Seattle)SIGLEC17P
Human Protein Atlas [tissue]ENSG00000171101-SIGLEC17P [tissue]
Protein Interaction databases
FunCoupENSG00000171101
BioGRIDSIGLEC17P
STRING (EMBL)SIGLEC17P
ZODIACSIGLEC17P
Ontologies - Pathways
Huge Navigator SIGLEC17P [HugePedia]
snp3D : Map Gene to Disease284367
BioCentury BCIQSIGLEC17P
ClinGenSIGLEC17P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284367
Chemical/Pharm GKB GenePA37993
Clinical trialSIGLEC17P
Miscellaneous
canSAR (ICR)SIGLEC17P (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSIGLEC17P
EVEXSIGLEC17P
GoPubMedSIGLEC17P
iHOPSIGLEC17P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:39:52 CET 2017

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