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SIRPA (signal regulatory protein alpha)

Identity

Alias (NCBI)BIT
CD172A
MFR
MYD-1
P84
PTPNS1
SHPS1
SIRP
HGNC (Hugo) SIRPA
HGNC Alias symbSHPS1
SIRP
MYD-1
BIT
P84
SHPS-1
SIRPalpha
CD172a
SIRPalpha2
MFR
SIRP-ALPHA-1
HGNC Previous namePTPNS1
HGNC Previous nameprotein tyrosine phosphatase, non-receptor type substrate 1
 signal-regulatory protein alpha
LocusID (NCBI) 140885
Atlas_Id 45658
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 1894742 and ends at 1940592 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SIRPA (20p13) / HNRNPUL2 (11q12.3)USP11 (Xp11.23) / SIRPA (20p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SIRPA   9662
Cards
Entrez_Gene (NCBI)SIRPA    signal regulatory protein alpha
AliasesBIT; CD172A; MFR; MYD-1; 
P84; PTPNS1; SHPS1; SIRP
GeneCards (Weizmann)SIRPA
Ensembl hg19 (Hinxton)ENSG00000198053 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198053 [Gene_View]  ENSG00000198053 [Sequence]  chr20:1894742-1940592 [Contig_View]  SIRPA [Vega]
ICGC DataPortalENSG00000198053
TCGA cBioPortalSIRPA
AceView (NCBI)SIRPA
Genatlas (Paris)SIRPA
SOURCE (Princeton)SIRPA
Genetics Home Reference (NIH)SIRPA
Genomic and cartography
GoldenPath hg38 (UCSC)SIRPA  -     chr20:1894742-1940592 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SIRPA  -     20p13   [Description]    (hg19-Feb_2009)
GoldenPathSIRPA - 20p13 [CytoView hg19]  SIRPA - 20p13 [CytoView hg38]
ImmunoBaseENSG00000198053
Genome Data Viewer NCBISIRPA [Mapview hg19]  
OMIM602461   
Gene and transcription
Genbank (Entrez)AB023430 AK290776 AK298243 AK312521 BC026692
RefSeq transcript (Entrez)NM_001040022 NM_001040023 NM_001330728 NM_080792
Consensus coding sequences : CCDS (NCBI)SIRPA
Gene ExpressionSIRPA [ NCBI-GEO ]   SIRPA [ EBI - ARRAY_EXPRESS ]   SIRPA [ SEEK ]   SIRPA [ MEM ]
Gene Expression Viewer (FireBrowse)SIRPA [ Firebrowse - Broad ]
GenevisibleExpression of SIRPA in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140885
GTEX Portal (Tissue expression)SIRPA
Human Protein AtlasENSG00000198053-SIRPA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SIRPA
Human Protein Atlas [tissue]ENSG00000198053-SIRPA [tissue]
HPRD03912
Protein Interaction databases
BioGRIDSIRPA
STRING (EMBL)SIRPA
ZODIACSIRPA
Ontologies - Pathways
Litterature
PubMed131 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSIRPA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:31:13 CEST 2021

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