Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SIRPG-AS1 (SIRPG antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SIRPG-AS1
LocusID (NCBI) 101929010
Atlas_Id 73255
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 1633508 and ends at 1648473 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SIRPG-AS1   51229
Cards
Entrez_Gene (NCBI)SIRPG-AS1  101929010  SIRPG antisense RNA 1
Aliases
GeneCards (Weizmann)SIRPG-AS1
Ensembl hg19 (Hinxton)ENSG00000237914 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237914 [Gene_View]  chr20:1633508-1648473 [Contig_View]  SIRPG-AS1 [Vega]
ICGC DataPortalENSG00000237914
TCGA cBioPortalSIRPG-AS1
AceView (NCBI)SIRPG-AS1
Genatlas (Paris)SIRPG-AS1
WikiGenes101929010
SOURCE (Princeton)SIRPG-AS1
Genetics Home Reference (NIH)SIRPG-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SIRPG-AS1  -     chr20:1633508-1648473 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SIRPG-AS1  -     20p13   [Description]    (hg19-Feb_2009)
EnsemblSIRPG-AS1 - 20p13 [CytoView hg19]  SIRPG-AS1 - 20p13 [CytoView hg38]
Mapping of homologs : NCBISIRPG-AS1 [Mapview hg19]  SIRPG-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA861235 AK093519 HY205132
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SIRPG-AS1
Cluster EST : UnigeneHs.570358 [ NCBI ]
CGAP (NCI)Hs.570358
Alternative Splicing GalleryENSG00000237914
Gene ExpressionSIRPG-AS1 [ NCBI-GEO ]   SIRPG-AS1 [ EBI - ARRAY_EXPRESS ]   SIRPG-AS1 [ SEEK ]   SIRPG-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SIRPG-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929010
GTEX Portal (Tissue expression)SIRPG-AS1
Human Protein AtlasENSG00000237914-SIRPG-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SIRPG-AS1
DMDM Disease mutations101929010
Blocks (Seattle)SIRPG-AS1
Human Protein Atlas [tissue]ENSG00000237914-SIRPG-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000237914
BioGRIDSIRPG-AS1
STRING (EMBL)SIRPG-AS1
ZODIACSIRPG-AS1
Ontologies - Pathways
Huge Navigator SIRPG-AS1 [HugePedia]
snp3D : Map Gene to Disease101929010
BioCentury BCIQSIRPG-AS1
ClinGenSIRPG-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929010
Clinical trialSIRPG-AS1
Miscellaneous
canSAR (ICR)SIRPG-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSIRPG-AS1
EVEXSIRPG-AS1
GoPubMedSIRPG-AS1
iHOPSIRPG-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:42:12 CET 2017

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