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SIRT6 (sirtuin 6)

Identity

Alias (NCBI)SIR2L6
HGNC (Hugo) SIRT6
HGNC Previous namesirtuin (silent mating type information regulation 2, S. cerevisiae, homolog) 6
 sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)
LocusID (NCBI) 51548
Atlas_Id 47142
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 4174109 and ends at 4182563 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SIRT6 (19p13.3) / CERS4 (19p13.2)SIRT6 (19p13.3) / SDC3 (1p35.2)SIRT6 19p13.3 / CERS4 19p13.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SIRT6   14934
Cards
Entrez_Gene (NCBI)SIRT6    sirtuin 6
AliasesSIR2L6
GeneCards (Weizmann)SIRT6
Ensembl hg19 (Hinxton)ENSG00000077463 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000077463 [Gene_View]  ENSG00000077463 [Sequence]  chr19:4174109-4182563 [Contig_View]  SIRT6 [Vega]
ICGC DataPortalENSG00000077463
TCGA cBioPortalSIRT6
AceView (NCBI)SIRT6
Genatlas (Paris)SIRT6
SOURCE (Princeton)SIRT6
Genetics Home Reference (NIH)SIRT6
Genomic and cartography
GoldenPath hg38 (UCSC)SIRT6  -     chr19:4174109-4182563 -  19p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SIRT6  -     19p13.3   [Description]    (hg19-Feb_2009)
GoldenPathSIRT6 - 19p13.3 [CytoView hg19]  SIRT6 - 19p13.3 [CytoView hg38]
ImmunoBaseENSG00000077463
genome Data Viewer NCBISIRT6 [Mapview hg19]  
OMIM606211   
Gene and transcription
Genbank (Entrez)AF233396 AK074810 AK225567 AK293348 AK299420
RefSeq transcript (Entrez)NM_001193285 NM_001321058 NM_001321059 NM_001321060 NM_001321061 NM_001321062 NM_001321063 NM_001321064 NM_016539
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SIRT6
Alternative Splicing GalleryENSG00000077463
Gene ExpressionSIRT6 [ NCBI-GEO ]   SIRT6 [ EBI - ARRAY_EXPRESS ]   SIRT6 [ SEEK ]   SIRT6 [ MEM ]
Gene Expression Viewer (FireBrowse)SIRT6 [ Firebrowse - Broad ]
GenevisibleExpression of SIRT6 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51548
GTEX Portal (Tissue expression)SIRT6
Human Protein AtlasENSG00000077463-SIRT6 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SIRT6
Blocks (Seattle)SIRT6
Human Protein Atlas [tissue]ENSG00000077463-SIRT6 [tissue]
HPRD12093
IPIIPI00383640   IPI00396170   IPI00556638   IPI01014474   IPI00332636   
Protein Interaction databases
BioGRIDSIRT6
STRING (EMBL)SIRT6
ZODIACSIRT6
Ontologies - Pathways
Litterature
PubMed222 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSIRT6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:45:42 CET 2021

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