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SIX3-AS1 (SIX3 antisense RNA 1)

Identity

Alias_namesSIX3 antisense RNA 1 (non-protein coding)
Other aliasSIX3OS
HGNC (Hugo) SIX3-AS1
LocusID (NCBI) 100506108
Atlas_Id 73258
Location 2p21  [Link to chromosome band 2p21]
Location_base_pair Starts at 44940154 and ends at 44941507 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SIX3-AS1   40532
Cards
Entrez_Gene (NCBI)SIX3-AS1  100506108  SIX3 antisense RNA 1
AliasesSIX3OS
GeneCards (Weizmann)SIX3-AS1
Ensembl hg19 (Hinxton)ENSG00000236502 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236502 [Gene_View]  chr2:44940154-44941507 [Contig_View]  SIX3-AS1 [Vega]
ICGC DataPortalENSG00000236502
TCGA cBioPortalSIX3-AS1
AceView (NCBI)SIX3-AS1
Genatlas (Paris)SIX3-AS1
WikiGenes100506108
SOURCE (Princeton)SIX3-AS1
Genetics Home Reference (NIH)SIX3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SIX3-AS1  -     chr2:44940154-44941507 -  2p21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SIX3-AS1  -     2p21   [Description]    (hg19-Feb_2009)
EnsemblSIX3-AS1 - 2p21 [CytoView hg19]  SIX3-AS1 - 2p21 [CytoView hg38]
Mapping of homologs : NCBISIX3-AS1 [Mapview hg19]  SIX3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM663835
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SIX3-AS1
Cluster EST : UnigeneHs.503113 [ NCBI ]
CGAP (NCI)Hs.503113
Alternative Splicing GalleryENSG00000236502
Gene ExpressionSIX3-AS1 [ NCBI-GEO ]   SIX3-AS1 [ EBI - ARRAY_EXPRESS ]   SIX3-AS1 [ SEEK ]   SIX3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SIX3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506108
GTEX Portal (Tissue expression)SIX3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SIX3-AS1
DMDM Disease mutations100506108
Blocks (Seattle)SIX3-AS1
Human Protein AtlasENSG00000236502
Protein Interaction databases
FunCoupENSG00000236502
BioGRIDSIX3-AS1
STRING (EMBL)SIX3-AS1
ZODIACSIX3-AS1
Ontologies - Pathways
Huge Navigator SIX3-AS1 [HugePedia]
snp3D : Map Gene to Disease100506108
BioCentury BCIQSIX3-AS1
ClinGenSIX3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506108
Clinical trialSIX3-AS1
Miscellaneous
canSAR (ICR)SIX3-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSIX3-AS1
EVEXSIX3-AS1
GoPubMedSIX3-AS1
iHOPSIX3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed May 31 15:40:47 CEST 2017

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