Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SKP1P1 (S-phase kinase associated protein 1 pseudogene 1)

Identity

Alias (NCBI)EMC19
OCP2
TCEB1L
TCEB1P
TCEB1P1
HGNC (Hugo) SKP1P1
HGNC Alias symbEMC19
HGNC Previous nameOCP2
 TCEB1L
 TCEB1P
HGNC Previous nametranscription elongation factor B (SIII), polypeptide 1-like
 transcription elongation factor B (SIII), polypeptide 1 pseudogene
LocusID (NCBI) 6922
Atlas_Id 79461
Location 7q11.21  [Link to chromosome band 7q11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)SKP1P1   33696
Cards
Entrez_Gene (NCBI)SKP1P1    S-phase kinase associated protein 1 pseudogene 1
AliasesEMC19; OCP2; TCEB1L; TCEB1P; 
TCEB1P1
GeneCards (Weizmann)SKP1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  SKP1P1 [Vega]
TCGA cBioPortalSKP1P1
AceView (NCBI)SKP1P1
Genatlas (Paris)SKP1P1
SOURCE (Princeton)SKP1P1
Genetics Home Reference (NIH)SKP1P1
Genomic and cartography
GoldenPath hg38 (UCSC)SKP1P1  -  
GoldenPath hg19 (UCSC)SKP1P1  -  
GoldenPathSKP1P1 - [CytoView hg19]  SKP1P1 - [CytoView hg38]
Genome Data Viewer NCBISKP1P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)SKP1P1
Gene ExpressionSKP1P1 [ NCBI-GEO ]   SKP1P1 [ EBI - ARRAY_EXPRESS ]   SKP1P1 [ SEEK ]   SKP1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)SKP1P1 [ Firebrowse - Broad ]
GenevisibleExpression of SKP1P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6922
GTEX Portal (Tissue expression)SKP1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SKP1P1
Protein Interaction databases
BioGRIDSKP1P1
STRING (EMBL)SKP1P1
ZODIACSKP1P1
Ontologies - Pathways
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSKP1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:20:37 CEST 2021

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