Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SKP1P1 (S-phase kinase associated protein 1 pseudogene 1)

Identity

Alias (NCBI)EMC19
OCP2
TCEB1L
TCEB1P
TCEB1P1
HGNC (Hugo) SKP1P1
HGNC Alias symbEMC19
HGNC Previous nameOCP2
 TCEB1L
 TCEB1P
HGNC Previous nametranscription elongation factor B (SIII), polypeptide 1-like
 transcription elongation factor B (SIII), polypeptide 1 pseudogene
LocusID (NCBI) 6922
Atlas_Id 79461
Location 7q11.21  [Link to chromosome band 7q11]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SKP1P1   33696
Cards
Entrez_Gene (NCBI)SKP1P1  6922  S-phase kinase associated protein 1 pseudogene 1
AliasesEMC19; OCP2; TCEB1L; TCEB1P; 
TCEB1P1
GeneCards (Weizmann)SKP1P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  SKP1P1 [Vega]
TCGA cBioPortalSKP1P1
AceView (NCBI)SKP1P1
Genatlas (Paris)SKP1P1
WikiGenes6922
SOURCE (Princeton)SKP1P1
Genetics Home Reference (NIH)SKP1P1
Genomic and cartography
GoldenPath hg38 (UCSC)SKP1P1  -  
GoldenPath hg19 (UCSC)SKP1P1  -  
GoldenPathSKP1P1 - [CytoView hg19]  SKP1P1 - [CytoView hg38]
genome Data Viewer NCBISKP1P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SKP1P1
Gene ExpressionSKP1P1 [ NCBI-GEO ]   SKP1P1 [ EBI - ARRAY_EXPRESS ]   SKP1P1 [ SEEK ]   SKP1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)SKP1P1 [ Firebrowse - Broad ]
GenevisibleExpression of SKP1P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6922
GTEX Portal (Tissue expression)SKP1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SKP1P1
DMDM Disease mutations6922
Blocks (Seattle)SKP1P1
Protein Interaction databases
BioGRIDSKP1P1
STRING (EMBL)SKP1P1
ZODIACSKP1P1
Ontologies - Pathways
Huge Navigator SKP1P1 [HugePedia]
snp3D : Map Gene to Disease6922
BioCentury BCIQSKP1P1
ClinGenSKP1P1
Clinical trials, drugs, therapy
Protein Interactions : CTD6922
Pharm GKB GenePA36377
Clinical trialSKP1P1
Miscellaneous
canSAR (ICR)SKP1P1 (select the gene name)
HarmonizomeSKP1P1
DataMed IndexSKP1P1
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSKP1P1
EVEXSKP1P1
GoPubMedSKP1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:27:44 CEST 2020

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