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SLA (Src-like-adaptor)

Identity

Alias_namesSrc-like-adapter
Alias_symbol (synonym)SLA1
Other aliasSLAP
HGNC (Hugo) SLA
LocusID (NCBI) 6503
Atlas_Id 53425
Location 8q24.22  [Link to chromosome band 8q24]
Location_base_pair Starts at 134048973 and ends at 134115310 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLA   10902
Cards
Entrez_Gene (NCBI)SLA  6503  Src-like-adaptor
AliasesSLA1; SLAP
GeneCards (Weizmann)SLA
Ensembl hg19 (Hinxton)ENSG00000155926 [Gene_View]  chr8:134048973-134115310 [Contig_View]  SLA [Vega]
Ensembl hg38 (Hinxton)ENSG00000155926 [Gene_View]  chr8:134048973-134115310 [Contig_View]  SLA [Vega]
ICGC DataPortalENSG00000155926
TCGA cBioPortalSLA
AceView (NCBI)SLA
Genatlas (Paris)SLA
WikiGenes6503
SOURCE (Princeton)SLA
Genetics Home Reference (NIH)SLA
Genomic and cartography
GoldenPath hg19 (UCSC)SLA  -     chr8:134048973-134115310 -  8q24.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SLA  -     8q24.22   [Description]    (hg38-Dec_2013)
EnsemblSLA - 8q24.22 [CytoView hg19]  SLA - 8q24.22 [CytoView hg38]
Mapping of homologs : NCBISLA [Mapview hg19]  SLA [Mapview hg38]
OMIM601099   
Gene and transcription
Genbank (Entrez)AJ238591 AK297423 AK297519 AK309401 AK310092
RefSeq transcript (Entrez)NM_001045556 NM_001045557 NM_001282964 NM_001282965 NM_006748
RefSeq genomic (Entrez)NC_000008 NC_018919 NG_015832 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)SLA
Cluster EST : UnigeneHs.75367 [ NCBI ]
CGAP (NCI)Hs.75367
Alternative Splicing GalleryENSG00000155926
Gene ExpressionSLA [ NCBI-GEO ]   SLA [ EBI - ARRAY_EXPRESS ]   SLA [ SEEK ]   SLA [ MEM ]
Gene Expression Viewer (FireBrowse)SLA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6503
GTEX Portal (Tissue expression)SLA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13239   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13239  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13239
Splice isoforms : SwissVarQ13239
PhosPhoSitePlusQ13239
Domaine pattern : Prosite (Expaxy)SH2 (PS50001)    SH3 (PS50002)   
Domains : Interpro (EBI)SH2    SH3_domain   
Domain families : Pfam (Sanger)SH2 (PF00017)    SH3_1 (PF00018)   
Domain families : Pfam (NCBI)pfam00017    pfam00018   
Domain families : Smart (EMBL)SH2 (SM00252)  SH3 (SM00326)  
Conserved Domain (NCBI)SLA
DMDM Disease mutations6503
Blocks (Seattle)SLA
PDB (SRS)2CUD   
PDB (PDBSum)2CUD   
PDB (IMB)2CUD   
PDB (RSDB)2CUD   
Structural Biology KnowledgeBase2CUD   
SCOP (Structural Classification of Proteins)2CUD   
CATH (Classification of proteins structures)2CUD   
SuperfamilyQ13239
Human Protein AtlasENSG00000155926
Peptide AtlasQ13239
HPRD03060
IPIIPI00009499   IPI00793128   IPI00795416   IPI00977870   IPI00976220   IPI00983866   IPI00984503   IPI00973915   IPI00984445   IPI00976793   IPI00975480   IPI00985004   
Protein Interaction databases
DIP (DOE-UCLA)Q13239
IntAct (EBI)Q13239
FunCoupENSG00000155926
BioGRIDSLA
STRING (EMBL)SLA
ZODIACSLA
Ontologies - Pathways
QuickGOQ13239
Ontology : AmiGOSH3/SH2 adaptor activity  protein binding  endosome  positive regulation of signal transduction  
Ontology : EGO-EBISH3/SH2 adaptor activity  protein binding  endosome  positive regulation of signal transduction  
NDEx NetworkSLA
Atlas of Cancer Signalling NetworkSLA
Wikipedia pathwaysSLA
Orthology - Evolution
OrthoDB6503
GeneTree (enSembl)ENSG00000155926
Phylogenetic Trees/Animal Genes : TreeFamSLA
HOVERGENQ13239
HOGENOMQ13239
Homologs : HomoloGeneSLA
Homology/Alignments : Family Browser (UCSC)SLA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLA
dbVarSLA
ClinVarSLA
1000_GenomesSLA 
Exome Variant ServerSLA
ExAC (Exome Aggregation Consortium)SLA (select the gene name)
Genetic variants : HAPMAP6503
Genomic Variants (DGV)SLA [DGVbeta]
DECIPHER (Syndromes)8:134048973-134115310  ENSG00000155926
CONAN: Copy Number AnalysisSLA 
Mutations
ICGC Data PortalSLA 
TCGA Data PortalSLA 
Broad Tumor PortalSLA
OASIS PortalSLA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SLA
DgiDB (Drug Gene Interaction Database)SLA
DoCM (Curated mutations)SLA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLA (select a term)
intoGenSLA
Cancer3DSLA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601099   
Orphanet
MedgenSLA
Genetic Testing Registry SLA
NextProtQ13239 [Medical]
TSGene6503
GENETestsSLA
Huge Navigator SLA [HugePedia]
snp3D : Map Gene to Disease6503
BioCentury BCIQSLA
ClinGenSLA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6503
Chemical/Pharm GKB GenePA35802
Clinical trialSLA
Miscellaneous
canSAR (ICR)SLA (select the gene name)
Probes
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLA
EVEXSLA
GoPubMedSLA
iHOPSLA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 13:27:26 CET 2017

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