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SLC12A8 (solute carrier family 12 member 8)

Identity

Alias (NCBI)CCC9
HGNC (Hugo) SLC12A8
HGNC Alias symbCCC9
HGNC Alias namesolute carrier family 12 (sodium/potassium/chloride transporters), member 8
 cation-chloride cotransporter 9
LocusID (NCBI) 84561
Atlas_Id 54624
Location 3q21.2  [Link to chromosome band 3q21]
Location_base_pair Starts at 125082636 and ends at 125212765 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KIAA0232 (4p16.1) / SLC12A8 (3q21.2)KIAA1429 (8q22.1) / SLC12A8 (3q21.2)LOC100302640 () / SLC12A8 (3q21.2)
SCAMP2 (15q24.1) / SLC12A8 (3q21.2)SLC12A8 (3q21.2) / BCAS1 (20q13.2)SLC12A8 (3q21.2) / BFSP2 (3q22.1)
SLC12A8 (3q21.2) / CALCOCO2 (17q21.32)SLC12A8 (3q21.2) / EZR (6q25.3)SLC12A8 (3q21.2) / HTN1 (4q13.3)
SLC12A8 (3q21.2) / MYLK (3q21.1)SLC12A8 (3q21.2) / SLC12A8 (3q21.2)SLC12A8 (3q21.2) / ZFP36 (19q13.2)
SCAMP2 15q24.1 / SLC12A8 3q21.2SLC12A8 3q21.2 / BCAS1 20q13.2SLC12A8 3q21.2 / BFSP2 3q22.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)SLC12A8   15595
Cards
Entrez_Gene (NCBI)SLC12A8    solute carrier family 12 member 8
AliasesCCC9
GeneCards (Weizmann)SLC12A8
Ensembl hg19 (Hinxton)ENSG00000221955 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221955 [Gene_View]  ENSG00000221955 [Sequence]  chr3:125082636-125212765 [Contig_View]  SLC12A8 [Vega]
ICGC DataPortalENSG00000221955
TCGA cBioPortalSLC12A8
AceView (NCBI)SLC12A8
Genatlas (Paris)SLC12A8
SOURCE (Princeton)SLC12A8
Genetics Home Reference (NIH)SLC12A8
Genomic and cartography
GoldenPath hg38 (UCSC)SLC12A8  -     chr3:125082636-125212765 -  3q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC12A8  -     3q21.2   [Description]    (hg19-Feb_2009)
GoldenPathSLC12A8 - 3q21.2 [CytoView hg19]  SLC12A8 - 3q21.2 [CytoView hg38]
ImmunoBaseENSG00000221955
Genome Data Viewer NCBISLC12A8 [Mapview hg19]  
OMIM611316   
Gene and transcription
Genbank (Entrez)AA331231 AA593021 AF345197 AF390442 AK026841
RefSeq transcript (Entrez)NM_001195483 NM_024628
Consensus coding sequences : CCDS (NCBI)SLC12A8
Gene ExpressionSLC12A8 [ NCBI-GEO ]   SLC12A8 [ EBI - ARRAY_EXPRESS ]   SLC12A8 [ SEEK ]   SLC12A8 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC12A8 [ Firebrowse - Broad ]
GenevisibleExpression of SLC12A8 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84561
GTEX Portal (Tissue expression)SLC12A8
Human Protein AtlasENSG00000221955-SLC12A8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC12A8
Human Protein Atlas [tissue]ENSG00000221955-SLC12A8 [tissue]
HPRD11563
Protein Interaction databases
BioGRIDSLC12A8
STRING (EMBL)SLC12A8
ZODIACSLC12A8
Ontologies - Pathways
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXSLC12A8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:31:22 CEST 2021

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