Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SLC16A12-AS1 (SLC16A12 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SLC16A12-AS1
LocusID (NCBI) 101926906
Atlas_Id 73291
Location 10q23.31  [Link to chromosome band 10q23]
Location_base_pair Starts at 89455991 and ends at 89468151 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC16A12-AS1   51205
Cards
Entrez_Gene (NCBI)SLC16A12-AS1  101926906  SLC16A12 antisense RNA 1
Aliases
GeneCards (Weizmann)SLC16A12-AS1
Ensembl hg19 (Hinxton)ENSG00000234452 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234452 [Gene_View]  chr10:89455991-89468151 [Contig_View]  SLC16A12-AS1 [Vega]
ICGC DataPortalENSG00000234452
TCGA cBioPortalSLC16A12-AS1
AceView (NCBI)SLC16A12-AS1
Genatlas (Paris)SLC16A12-AS1
WikiGenes101926906
SOURCE (Princeton)SLC16A12-AS1
Genetics Home Reference (NIH)SLC16A12-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SLC16A12-AS1  -     chr10:89455991-89468151 +  10q23.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC16A12-AS1  -     10q23.31   [Description]    (hg19-Feb_2009)
EnsemblSLC16A12-AS1 - 10q23.31 [CytoView hg19]  SLC16A12-AS1 - 10q23.31 [CytoView hg38]
Mapping of homologs : NCBISLC16A12-AS1 [Mapview hg19]  SLC16A12-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX089497 DB088249
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC16A12-AS1
Cluster EST : UnigeneHs.568874 [ NCBI ]
CGAP (NCI)Hs.568874
Alternative Splicing GalleryENSG00000234452
Gene ExpressionSLC16A12-AS1 [ NCBI-GEO ]   SLC16A12-AS1 [ EBI - ARRAY_EXPRESS ]   SLC16A12-AS1 [ SEEK ]   SLC16A12-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC16A12-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101926906
GTEX Portal (Tissue expression)SLC16A12-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SLC16A12-AS1
DMDM Disease mutations101926906
Blocks (Seattle)SLC16A12-AS1
Human Protein AtlasENSG00000234452
Protein Interaction databases
FunCoupENSG00000234452
BioGRIDSLC16A12-AS1
STRING (EMBL)SLC16A12-AS1
ZODIACSLC16A12-AS1
Ontologies - Pathways
Huge Navigator SLC16A12-AS1 [HugePedia]
snp3D : Map Gene to Disease101926906
BioCentury BCIQSLC16A12-AS1
ClinGenSLC16A12-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101926906
Clinical trialSLC16A12-AS1
Miscellaneous
canSAR (ICR)SLC16A12-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC16A12-AS1
EVEXSLC16A12-AS1
GoPubMedSLC16A12-AS1
iHOPSLC16A12-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:40:53 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.