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SLC20A2 (solute carrier family 20 (phosphate transporter), member 2)

Identity

Other namesGLVR-2
GLVR2
IBGC3
MLVAR
PIT-2
PIT2
RAM1
HGNC (Hugo) SLC20A2
LocusID (NCBI) 6575
Location 8p11.21
Location_base_pair Starts at 42273980 and ends at 42358978 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)SLC20A2   10947
Entrez_Gene (NCBI)SLC20A2  6575  solute carrier family 20 (phosphate transporter), member 2
Cards
GeneCards (Weizmann)SLC20A2
Ensembl (Hinxton)ENSG00000168575 [Gene_View]  chr8:42273980-42358978 [Contig_View]  SLC20A2 [Vega]
AceView (NCBI)SLC20A2
Genatlas (Paris)SLC20A2
SOURCE (Stanford)NM_001257180 NM_001257181 NM_006749
Genomic and cartography
GoldenPath (UCSC)SLC20A2  -  8p11.21   chr8:42273980-42358978 -  8p11.21   [Description]    (hg19-Feb_2009)
EnsemblSLC20A2 - 8p11.21 [CytoView]
Mapping of homologs : NCBISLC20A2 [Mapview]
OMIM158378   614540   
Gene and transcription
Genbank (Entrez)AK291202 AK295952 AK314774 BC028600 DA418477
RefSeq transcript (SRS)NM_001257180 NM_001257181 NM_006749
RefSeq transcript (Entrez)NM_001257180 NM_001257181 NM_006749
RefSeq genomic (SRS)AC_000140 NC_000008 NC_018919 NG_032161 NT_167187 NW_001839130 NW_004078035
RefSeq genomic (Entrez)AC_000140 NC_000008 NC_018919 NG_032161 NT_167187 NW_001839130 NW_004078035
Consensus coding sequences : CCDS (NCBI)SLC20A2
Cluster EST : UnigeneHs.654763 [ SRS ] Hs.654763 [ NCBI ]
CGAP (NCI)Hs.654763
Alternative Splicing : Fast-db (Paris)GSHG0029553
Alternative Splicing GalleryENSG00000168575
Gene ExpressionSLC20A2 [ NCBI-GEO ]   SLC20A2 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ08357 (SRS) Q08357 (Uniprot)
NextProtQ08357
With graphics : InterProQ08357
Splice isoforms : SwissVarQ08357(Swissvar)
Domains : Interpro (SRS)Phos_transporter   
Domains : Interpro (EBI)Phos_transporter   
Related proteins : CluSTrQ08357
Domain families : Pfam (SRS)PHO4 (PF01384)   
Domain families : Pfam (Sanger)PHO4 (PF01384)   
Domain families : Pfam (NCBI)pfam01384   
DMDM6575
Blocks (Seattle)Q08357
Human Protein AtlasENSG00000168575
HPRD08865
IPIIPI00009504   IPI00789543   IPI01014078   IPI00979013   IPI00980180   IPI00976815   
Protein Interaction databases
DIP (DOE-UCLA)Q08357
IntAct (EBI)Q08357
FunCoupENSG00000168575
REACTOMESLC20A2
Protein Interaction Database6575
BioGRIDSLC20A2
InParanoidQ08357
Interologous Interaction database Q08357
IntegromeDBSLC20A2
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)SLC20A2
SNP (GeneSNP Utah)SLC20A2
SNP : HGBaseSLC20A2
Genetic variants : HAPMAPSLC20A2
Somatic Mutations in Cancer : COSMICSLC20A2 
CONAN: Copy Number AnalysisSLC20A2 
Mutations and Diseases : HGMDSLC20A2
OMIM158378    614540   
GENETests158378    614540   
Disease Genetic AssociationSLC20A2
Huge Navigator SLC20A2 [HugePedia]  SLC20A2 [HugeCancerGEM]
Genomic VariantsSLC20A2  SLC20A2 [DGVbeta]
snp3D : Map Gene to Disease6575
General knowledge
Homologs : HomoloGeneSLC20A2
Homology/Alignments : Family Browser (UCSC)SLC20A2
Phylogenetic Trees/Animal Genes : TreeFamSLC20A2
Chemical/Protein Interactions : CTD6575
Chemical/Pharm GKB GenePA35834
Clinical trialSLC20A2
Cancer Resource (Charite)ENSG00000168575
Ontology : AmiGOreceptor activity  inorganic phosphate transmembrane transporter activity  sodium:phosphate symporter activity  plasma membrane  integral to plasma membrane  transport  ion transport  membrane  virus-host interaction  transmembrane transport  
Ontology : EGO-EBIreceptor activity  inorganic phosphate transmembrane transporter activity  sodium:phosphate symporter activity  plasma membrane  integral to plasma membrane  transport  ion transport  membrane  virus-host interaction  transmembrane transport  
Other databases
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
PubGeneSLC20A2
iHOPSLC20A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:32:14 CEST 2013
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