Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SLC22A14 (solute carrier family 22 member 14)

Identity

Alias_namesORCTL4
organic cationic transporter-like 4
solute carrier family 22 (organic cation transporter), member 14
solute carrier family 22, member 14
Alias_symbol (synonym)OCTL2
Other aliasOCTL4
HGNC (Hugo) SLC22A14
LocusID (NCBI) 9389
Atlas_Id 73317
Location 3p22.2  [Link to chromosome band 3p22]
Location_base_pair Starts at 38282294 and ends at 38318575 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SLC22A14   8495
Cards
Entrez_Gene (NCBI)SLC22A14  9389  solute carrier family 22 member 14
AliasesOCTL2; OCTL4; ORCTL4
GeneCards (Weizmann)SLC22A14
Ensembl hg19 (Hinxton)ENSG00000144671 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144671 [Gene_View]  chr3:38282294-38318575 [Contig_View]  SLC22A14 [Vega]
ICGC DataPortalENSG00000144671
TCGA cBioPortalSLC22A14
AceView (NCBI)SLC22A14
Genatlas (Paris)SLC22A14
WikiGenes9389
SOURCE (Princeton)SLC22A14
Genetics Home Reference (NIH)SLC22A14
Genomic and cartography
GoldenPath hg38 (UCSC)SLC22A14  -     chr3:38282294-38318575 +  3p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SLC22A14  -     3p22.2   [Description]    (hg19-Feb_2009)
EnsemblSLC22A14 - 3p22.2 [CytoView hg19]  SLC22A14 - 3p22.2 [CytoView hg38]
Mapping of homologs : NCBISLC22A14 [Mapview hg19]  SLC22A14 [Mapview hg38]
OMIM604048   
Gene and transcription
Genbank (Entrez)AB011082 AI446196 AK130497 AK315317 BC075070
RefSeq transcript (Entrez)NM_001320033 NM_004803
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SLC22A14
Cluster EST : UnigeneHs.165559 [ NCBI ]
CGAP (NCI)Hs.165559
Alternative Splicing GalleryENSG00000144671
Gene ExpressionSLC22A14 [ NCBI-GEO ]   SLC22A14 [ EBI - ARRAY_EXPRESS ]   SLC22A14 [ SEEK ]   SLC22A14 [ MEM ]
Gene Expression Viewer (FireBrowse)SLC22A14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9389
GTEX Portal (Tissue expression)SLC22A14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y267   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y267  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y267
Splice isoforms : SwissVarQ9Y267
PhosPhoSitePlusQ9Y267
Domaine pattern : Prosite (Expaxy)MFS (PS50850)   
Domains : Interpro (EBI)MFS_dom    MFS_sugar_transport-like   
Domain families : Pfam (Sanger)Sugar_tr (PF00083)   
Domain families : Pfam (NCBI)pfam00083   
Conserved Domain (NCBI)SLC22A14
DMDM Disease mutations9389
Blocks (Seattle)SLC22A14
SuperfamilyQ9Y267
Human Protein AtlasENSG00000144671
Peptide AtlasQ9Y267
HPRD06811
IPIIPI00006316   IPI00926698   IPI01009425   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y267
IntAct (EBI)Q9Y267
FunCoupENSG00000144671
BioGRIDSLC22A14
STRING (EMBL)SLC22A14
ZODIACSLC22A14
Ontologies - Pathways
QuickGOQ9Y267
Ontology : AmiGOinorganic anion exchanger activity  integral component of plasma membrane  integral component of plasma membrane  organic cation transmembrane transporter activity  sodium-independent organic anion transmembrane transporter activity  organic cation transport  inorganic anion transport  sodium-independent organic anion transport  transmembrane transport  
Ontology : EGO-EBIinorganic anion exchanger activity  integral component of plasma membrane  integral component of plasma membrane  organic cation transmembrane transporter activity  sodium-independent organic anion transmembrane transporter activity  organic cation transport  inorganic anion transport  sodium-independent organic anion transport  transmembrane transport  
NDEx NetworkSLC22A14
Atlas of Cancer Signalling NetworkSLC22A14
Wikipedia pathwaysSLC22A14
Orthology - Evolution
OrthoDB9389
GeneTree (enSembl)ENSG00000144671
Phylogenetic Trees/Animal Genes : TreeFamSLC22A14
HOVERGENQ9Y267
HOGENOMQ9Y267
Homologs : HomoloGeneSLC22A14
Homology/Alignments : Family Browser (UCSC)SLC22A14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSLC22A14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SLC22A14
dbVarSLC22A14
ClinVarSLC22A14
1000_GenomesSLC22A14 
Exome Variant ServerSLC22A14
ExAC (Exome Aggregation Consortium)SLC22A14 (select the gene name)
Genetic variants : HAPMAP9389
Genomic Variants (DGV)SLC22A14 [DGVbeta]
DECIPHERSLC22A14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSLC22A14 
Mutations
ICGC Data PortalSLC22A14 
TCGA Data PortalSLC22A14 
Broad Tumor PortalSLC22A14
OASIS PortalSLC22A14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSLC22A14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSLC22A14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SLC22A14
DgiDB (Drug Gene Interaction Database)SLC22A14
DoCM (Curated mutations)SLC22A14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SLC22A14 (select a term)
intoGenSLC22A14
Cancer3DSLC22A14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604048   
Orphanet
MedgenSLC22A14
Genetic Testing Registry SLC22A14
NextProtQ9Y267 [Medical]
TSGene9389
GENETestsSLC22A14
Target ValidationSLC22A14
Huge Navigator SLC22A14 [HugePedia]
snp3D : Map Gene to Disease9389
BioCentury BCIQSLC22A14
ClinGenSLC22A14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9389
Chemical/Pharm GKB GenePA32815
Clinical trialSLC22A14
Miscellaneous
canSAR (ICR)SLC22A14 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSLC22A14
EVEXSLC22A14
GoPubMedSLC22A14
iHOPSLC22A14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:40:58 CEST 2017

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