Atlas of Genetics and Cytogenetics in Oncology and Haematology

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SLC25A27 (solute carrier family 25, member 27)

Identity

Other namesUCP4
HGNC (Hugo) SLC25A27
LocusID (NCBI) 9481
Location 6p12.3
Location_base_pair Starts at 46620652 and ends at 46645927 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)SLC25A27   21065
Entrez_Gene (NCBI)SLC25A27  9481  solute carrier family 25, member 27
Cards
GeneCards (Weizmann)SLC25A27
Ensembl (Hinxton)ENSG00000153291 [Gene_View]  chr6:46620652-46645927 [Contig_View]  SLC25A27 [Vega]
AceView (NCBI)SLC25A27
Genatlas (Paris)SLC25A27
SOURCE (Stanford)NM_001204051 NM_001204052 NM_004277
Genomic and cartography
GoldenPath (UCSC)SLC25A27  -  6p12.3   chr6:46620652-46645927 +  6p12.3   [Description]    (hg19-Feb_2009)
EnsemblSLC25A27 - 6p12.3 [CytoView]
Mapping of homologs : NCBISLC25A27 [Mapview]
OMIM613725   
Gene and transcription
Genbank (Entrez)AF110532 AK090871 AK291427 AK295233 AK302906
RefSeq transcript (SRS)NM_001204051 NM_001204052 NM_004277
RefSeq transcript (Entrez)NM_001204051 NM_001204052 NM_004277
RefSeq genomic (SRS)AC_000138 NC_000006 NC_018917 NT_007592 NW_001838981 NW_004078026
RefSeq genomic (Entrez)AC_000138 NC_000006 NC_018917 NT_007592 NW_001838981 NW_004078026
Consensus coding sequences : CCDS (NCBI)SLC25A27
Cluster EST : UnigeneHs.40510 [ SRS ] Hs.40510 [ NCBI ]
CGAP (NCI)Hs.40510
Alternative Splicing : Fast-db (Paris)GSHG0025779
Alternative Splicing GalleryENSG00000153291
Gene ExpressionSLC25A27 [ NCBI-GEO ]   SLC25A27 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95847 (SRS) O95847 (Uniprot)
NextProtO95847
With graphics : InterProO95847
Splice isoforms : SwissVarO95847(Swissvar)
Domaine pattern : Prosite (SRS)SOLCAR (PS50920)   
Domaine pattern : Prosite (Expaxy)SOLCAR (PS50920)   
Domains : Interpro (SRS)Mitochondrial_sb/sol_carrier    Mt_carrier_dom   
Domains : Interpro (EBI)Mitochondrial_sb/sol_carrier    Mt_carrier_dom   
Related proteins : CluSTrO95847
Domain families : Pfam (SRS)Mito_carr (PF00153)   
Domain families : Pfam (Sanger)Mito_carr (PF00153)   
Domain families : Pfam (NCBI)pfam00153   
DMDM9481
Blocks (Seattle)O95847
Human Protein AtlasENSG00000153291
HPRD15358
IPIIPI00383871   IPI00909650   IPI00640299   IPI00925337   IPI00980641   IPI00640903   IPI00644996   
Protein Interaction databases
DIP (DOE-UCLA)O95847
IntAct (EBI)O95847
FunCoupENSG00000153291
REACTOMESLC25A27
Protein Interaction Database9481
BioGRIDSLC25A27
InParanoidO95847
Interologous Interaction database O95847
IntegromeDBSLC25A27
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)SLC25A27
SNP (GeneSNP Utah)SLC25A27
SNP : HGBaseSLC25A27
Genetic variants : HAPMAPSLC25A27
Somatic Mutations in Cancer : COSMICSLC25A27 
CONAN: Copy Number AnalysisSLC25A27 
Mutations and Diseases : HGMDSLC25A27
OMIM613725   
GENETests613725   
Disease Genetic AssociationSLC25A27
Huge Navigator SLC25A27 [HugePedia]  SLC25A27 [HugeCancerGEM]
Genomic VariantsSLC25A27  SLC25A27 [DGVbeta]
snp3D : Map Gene to Disease9481
General knowledge
Homologs : HomoloGeneSLC25A27
Homology/Alignments : Family Browser (UCSC)SLC25A27
Phylogenetic Trees/Animal Genes : TreeFamSLC25A27
Chemical/Protein Interactions : CTD9481
Chemical/Pharm GKB GenePA134970102
Clinical trialSLC25A27
Cancer Resource (Charite)ENSG00000153291
Ontology : AmiGOmitochondrion  mitochondrial inner membrane  generation of precursor metabolites and energy  transport  integral to membrane  
Ontology : EGO-EBImitochondrion  mitochondrial inner membrane  generation of precursor metabolites and energy  transport  integral to membrane  
Other databases
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
PubGeneSLC25A27
iHOPSLC25A27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:30:52 CEST 2013
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